William J. Salerno

发表

PBHoney: identifying genomic variants via long-read discordance and interrupted mapping

Adam C. English, William J. Salerno, Jeffrey G. Reid, 2014, BMC Bioinformatics.

xAtlas: scalable small variant calling across heterogeneous next-generation sequencing experiments

Donna M. Muzny, Eric Boerwinkle, Olga Krasheninina, 2018, bioRxiv.

Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline

Simon White, Donna M. Muzny, Narayanan Veeraraghavan, 2014, BMC Bioinformatics.

Open-source mapping and variant calling for large-scale NGS data from original base-quality scores

William J. Salerno, Olga Krasheninina, Yih-Chii Hwang, 2020, bioRxiv.

MONSTER: inferring non-covalent interactions in macromolecular structures from atomic coordinate data

William J. Salerno, Samuel M. Seaver, Brian R. Armstrong, 2004, Nucleic Acids Res..

Optimized sample selection for cost-efficient long-read population sequencing

Michael C. Schatz, Zachary B. Lippman, Fritz J. Sedlazeck, 2020, bioRxiv.

SVCollector: Optimized sample selection for validating and long-read resequencing of structural variants

Michael C. Schatz, Zachary B. Lippman, Fritz J. Sedlazeck, 2018, bioRxiv.

GLnexus: joint variant calling for large cohort sequencing

Ohad Rodeh, Olga Krasheninina, William J. Salerno, 2018, bioRxiv.

VCPA: genomic variant calling pipeline and data management tool for Alzheimer’s Disease Sequencing Project

Yuk Yee Leung, Li-San Wang, Yi-Fan Chou, 2018, bioRxiv.

Sparse Project VCF: efficient encoding of population genotype matrices

Jeffrey S. Reid, William J. Salerno, Michael F. Lin, 2019, bioRxiv.

SVachra: a tool to identify genomic structural variation in mate pair sequencing data containing inward and outward facing reads

Donna M. Muzny, Adam C. English, Richard A. Gibbs, 2017, BMC Genomics.

Whole exome sequencing and characterization of coding variation in 49,960 individuals in the UK Biobank

Gonçalo Abecasis, Alan R. Shuldiner, Jeffrey Staples, 2019, bioRxiv.

Mapping and characterization of structural variation in 17,795 human genomes

Eric S. Lander, Haley J. Abel, Yeting Zhang, 2020, Nature.