Hongyi Zhou

发表

Performance of the Pro‐sp3‐TASSER server in CASP8

Jeffrey Skolnick, Hongyi Zhou, Shashi B Pandit, 2009, Proteins.

SPARKS 2 and SP3 servers in CASP6

Yaoqi Zhou, Hongyi Zhou, Hongyi Zhou, 2005, Proteins.

Quantitative Regularities of the Diversity of Lexical Meaning

Pranas Zunde, Hongyi Zhou, P. Zunde, 1990 .

Template‐based protein structure modeling using TASSERVMT

Jeffrey Skolnick, Hongyi Zhou, J. Skolnick, 2012, Proteins.

Why Is There a Glass Ceiling for Threading Based Protein Structure Prediction Methods?

Jeffrey Skolnick, Hongyi Zhou, J. Skolnick, 2017, The journal of physical chemistry. B.

Protein Structure Prediction

Hongyi Zhou, Yaoqi Zhou, Venkatarajan S. Mathura, 2009 .

DDOMAIN: Dividing structures into domains using a normalized domain–domain interaction profile

Yaoqi Zhou, Hongyi Zhou, Bin Xue, 2007, Protein science : a publication of the Protein Society.

Toward a physical energy function for intra- and inter-protein interactions by combining structural knowledge with physical principles

Song Liu, Yaoqi Zhou, Chi Zhang, 2004 .

Predicting the topology of transmembrane helical proteins using mean burial propensity and a hidden-Markov-model-based method

Yaoqi Zhou, Hongyi Zhou, Hongyi Zhou, 2003 .

Protein structure prediction by pro-Sp3-TASSER.

Jeffrey Skolnick, Hongyi Zhou, J. Skolnick, 2009, Biophysical journal.

Analysis of TASSER‐based CASP7 protein structure prediction results

Seung Yup Lee, Jeffrey Skolnick, Hongyi Zhou, 2007, Proteins.

Tasser‐Based Protein Structure Prediction

Jeffrey Skolnick, Hongyi Zhou, Shashi B. Pandit, 2010 .

WeFold: A coopetition for protein structure prediction

Adam Liwo, Yi He, David Baker, 2014, Proteins.

Improving threading algorithms for remote homology modeling by combining fragment and template comparisons

Jeffrey Skolnick, Hongyi Zhou, J. Skolnick, 2010, Proteins.

ENTPRISE-X: Predicting disease-associated frameshift and nonsense mutations

Jeffrey Skolnick, Mu Gao, Hongyi Zhou, 2018, PloS one.

Are predicted protein structures of any value for binding site prediction and virtual ligand screening?

Jeffrey Skolnick, Mu Gao, Hongyi Zhou, 2013, Current opinion in structural biology.

Rain-use efficiency and NDVI-based assessment of karst ecosystem degradation or recovery: a case study in Guangxi, China

Hongyi Zhou, Huixia Li, Xinghu Wei, 2015, Environmental Earth Sciences.

Protein model quality assessment prediction by combining fragment comparisons and a consensus Cα contact potential

Jeffrey Skolnick, Hongyi Zhou, J. Skolnick, 2008, Proteins.

The utility of geometrical and chemical restraint information extracted from predicted ligand-binding sites in protein structure refinement.

Michal Brylinski, Jeffrey Skolnick, Hongyi Zhou, 2011, Journal of structural biology.

Tumour amplified kinase STK15/BTAK induces centrosome amplification, aneuploidy and transformation

Jian Kuang, Hongyi Zhou, Subrata Sen, 1998, Nature Genetics.

Implications of the small number of distinct ligand binding pockets in proteins for drug discovery, evolution and biochemical function.

Jeffrey Skolnick, Mu Gao, Hongyi Zhou, 2015, Bioorganic & medicinal chemistry letters.

FINDSITE(X): a structure-based, small molecule virtual screening approach with application to all identified human GPCRs.

Jeffrey Skolnick, Hongyi Zhou, J. Skolnick, 2012, Molecular pharmaceutics.

Stability scale and atomic solvation parameters extracted from 1023 mutation experiments

Hongyi Zhou, Yaoqi Zhou, Hongyi Zhou, 2002, Proteins.

Fold recognition by combining sequence profiles derived from evolution and from depth‐dependent structural alignment of fragments

Hongyi Zhou, Yaoqi Zhou, Hongyi Zhou, 2004, Proteins.

ENTPRISE: An Algorithm for Predicting Human Disease-Associated Amino Acid Substitutions from Sequence Entropy and Predicted Protein Structures

Jeffrey Skolnick, Mu Gao, Hongyi Zhou, 2016, PloS one.

Amplification/overexpression of a mitotic kinase gene in human bladder cancer.

Feng Jiang, Hongyi Zhou, Subrata Sen, 2002, Journal of the National Cancer Institute.

The dual role of a loop with low loop contact distance in folding and domain swapping

Hongyi Zhou, Yaoqi Zhou, Hongyi Zhou, 2002, Protein science : a publication of the Protein Society.