Mirza Faisal Beg

发表

FreeSurfer-initiated fully-automated subcortical brain segmentation in MRI using Large Deformation Diffeomorphic Metric Mapping

Ali R. Khan, Lei Wang, Mirza Faisal Beg, 2008, NeuroImage.

Symmetric Data Attachment Terms for Large Deformation Image Registration

Ali R. Khan, Mirza Faisal Beg, M. Beg, 2007, IEEE Transactions on Medical Imaging.

Automatic Cycle Averaging for Denoising Approximately Periodic Spatiotemporal Signals

Mirza Faisal Beg, Gavin Weiguang Ding, Eric Lin, 2014, IEEE Transactions on Medical Imaging.

Biomedical Informatics Research Network: integrating multi-site neuroimaging data acquisition, data sharing and brain morphometric processing

Bruce R. Rosen, Carey E. Priebe, Michael I. Miller, 2005, 18th IEEE Symposium on Computer-Based Medical Systems (CBMS'05).

A semi-automated method for identifying and measuring myelinated nerve fibers in scanning electron microscope images

Mirza Faisal Beg, Eli Gibson, J. Maxwell Donelan, 2011, Journal of Neuroscience Methods.

Exact Surface Registration of Retinal Surfaces From 3-D Optical Coherence Tomography Images

Mirza Faisal Beg, Evgeniy Lebed, Marinko Sarunic, 2015, IEEE Transactions on Biomedical Engineering.

Longitudinal assessments of retinal degeneration after excitotoxic injury using an end-to-end pipeline with deep learning-based automatic layer segmentation

Mirza Faisal Beg, Kevin C. Chan, Da Ma, 2020 .

Deep Neural Network Based Quantification of Retinal Optical Coherence Tomography Images

Myeong Jin Ju, Mirza Faisal Beg, Pavle Prentasic, 2018 .

Computing Large Deformation Metric Mappings via Geodesic Flows of Diffeomorphisms

Alain Trouvé, Michael I. Miller, Mirza Faisal Beg, 2005, International Journal of Computer Vision.

Lei Wang, Mirza Faisal Beg, Pradeep Reddy Ramana, 2014, Alzheimer's & Dementia.

Segmentation of the foveal microvasculature using deep learning networks

Sven Loncaric, Mirza Faisal Beg, Morgan Heisler, 2016, Journal of biomedical optics.

Vertebra Segmentation for Clinical CT Images Using Mask R-CNN

Mirza Faisal Beg, Karteek Popuri, Renjie Wang, 2021 .

Morphometry of the myopic optic nerve head using FDOCT

Mirza Faisal Beg, Evgeniy Lebed, Marinko V. Sarunic, 2011, BiOS.

Optimal weights for local multi-atlas fusion using supervised learning and dynamic information (SuperDyn): Validation on hippocampus segmentation

Nicolas Cherbuin, Ali R. Khan, Mirza Faisal Beg, 2011, NeuroImage.

Optic Nerve Head Registration Via Hemispherical Surface and Volume Registration

Mirza Faisal Beg, Eli Gibson, Marinko Sarunic, 2010, IEEE Transactions on Biomedical Engineering.

Grant Report on PREDICT-ADFTD: Multimodal Imaging Prediction of AD/FTD and Differential Diagnosis

Mirza Faisal Beg, Karteek Popuri, Arthur W. Toga, 2019, Journal of psychiatry and brain science.

Morphological phenotyping of mouse hearts using optical coherence tomography

Michelle Cua, Marinko V Sarunic, Mirza Faisal Beg, 2014, Journal of biomedical optics.

GPU accelerated optical coherence tomography angiography using strip-based registration (Conference Presentation)

Dongkai Miao, Myeong Jin Ju, Yifan Jian, 2017, BiOS.

Computational cardiac anatomy using MRI

Mirza Faisal Beg, Michael I Miller, Raimond L Winslow, 2004, Magnetic resonance in medicine.

Large Deformation Diffeomorphism and Momentum Based Hippocampal Shape Discrimination in Dementia of the Alzheimer type

Michael I. Miller, Lei Wang, Mirza Faisal Beg, 2007, IEEE Transactions on Medical Imaging.

Multiple instance learning for age-related macular degeneration diagnosis in optical coherence tomography images

Mirza Faisal Beg, Gavin Weiguang Ding, Marinko Sarunic, 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017).

Brain geometry persistent homology marker for Parkinson's disease

Mirza Faisal Beg, Karteek Popuri, Donghuan Lu, 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017).

Cascaded Deep Neural Networks for Retinal Layer Segmentation of Optical Coherence Tomography with Fluid Presence pdf

Mirza Faisal Beg, Gavin Weiguang Ding, Morgan Heisler, 2019, ArXiv.

Multiscale deep neural network based analysis of FDG‐PET images for the early diagnosis of Alzheimer's disease

Mirza Faisal Beg, Karteek Popuri, Gavin Weiguang Ding, 2018, Medical Image Anal..

LDDMM-BASED ROBUST MULTI-TEMPLATE SUBCORTICAL SEGMENTATION USING AN ADNI TEMPLATE LIBRARY

Mirza Faisal Beg, Karteek Popuri, Donghuan Lu, 2016, Alzheimer's & Dementia.

Novel Surface-Smoothing Based Local Gyrification Index

Lei Wang, Mirza Faisal Beg, Evgeniy Lebed, 2013, IEEE Transactions on Medical Imaging.

Semi-supervised deep learning based 3D analysis of the peripapillary region.

Myeong Jin Ju, Marinko V Sarunic, Mirza Faisal Beg, 2020, Biomedical optics express.

Robust Atlas-Based Brain Segmentation Using Multi-structure Confidence-Weighted Registration

Moo K. Chung, Ali R. Khan, Mirza Faisal Beg, 2009, MICCAI.

Multistructure Large Deformation Diffeomorphic Brain Registration

Ali R. Khan, Lei Wang, Mirza Faisal Beg, 2013, IEEE Transactions on Biomedical Engineering.

Differential Diagnosis of Frontotemporal Dementia, Alzheimer's Disease, and Normal Aging Using a Multi-Scale Multi-Type Feature Generative Adversarial Deep Neural Network on Structural Magnetic Resonance Images

Lei Wang, Mirza Faisal Beg, Karteek Popuri, 2020, Frontiers in Neuroscience.

Ensemble Deep Learning for Diabetic Retinopathy Detection Using Optical Coherence Tomography Angiography

Mirza Faisal Beg, Morgan Heisler, Marinko V. Sarunic, 2020, Translational vision science & technology.

Automated identification of cone photoreceptors in adaptive optics optical coherence tomography images using transfer learning.

Myeong Jin Ju, Marinko V Sarunic, Mirza Faisal Beg, 2018, Biomedical optics express.

Estimation of 3D myocardial motion from tagged MRI using LDDMM

Mirza Faisal Beg, Elliot R. McVeigh, Vinay Kotamraju, 2007, SPIE Medical Imaging.

Consistent realignment of 3D diffusion tensor MRI eigenvectors

Mirza Faisal Beg, Laurent Younes, Ryan Dickie, 2007, SPIE Medical Imaging.

Segmentation of the macular choroid in OCT images acquired at 830nm and 1060nm

Mirza Faisal Beg, Marinko V. Sarunic, Sieun Lee, 2013, European Conference on Biomedical Optics.

Semi-automated Basal Ganglia Segmentation Using Large Deformation Diffeomorphic Metric Mapping

Michael I. Miller, Ali R. Khan, Mirza Faisal Beg, 2005, MICCAI.

Machine Learning-assisted Automated Quantification of Foveal Avascular Zone Parameters and Perifoveal Capillary Density of Prototype and Commercial Optical Coherence Tomography Angiography (OCT-A) Platforms in Healthy and Diabetic Eyes

Sven Loncaric, Mirza Faisal Beg, Pavle Prentasic, 2017 .

Quantization and analysis of hippocampal morphometric changes due to dementia of Alzheimer type using metric distances based on large deformation diffeomorphic metric mapping

Michael I. Miller, Lei Wang, Mirza Faisal Beg, 2011, Comput. Medical Imaging Graph..

Automated detection of amnestic mild cognitive impairment in community-dwelling elderly adults: A combined spatial atrophy and white matter alteration approach

Tao Liu, Jesse S. Jin, Suhuai Luo, 2012, NeuroImage.

Substantially thinner internal granular layer and reduced molecular layer surface in the cerebellar cortex of the Tc1 mouse model of down syndrome – a comprehensive morphometric analysis with active staining contrast-enhanced MRI

Sébastien Ourselin, Marc Modat, Mark F. Lythgoe, 2020, NeuroImage.

Computational anatomy: computing metrics on anatomical shapes

Alain Trouvé, Michael I. Miller, Mirza Faisal Beg, 2002, Proceedings IEEE International Symposium on Biomedical Imaging.

Deep‐learning based multiclass retinal fluid segmentation and detection in optical coherence tomography images using a fully convolutional neural network

Marinko V Sarunic, Mirza Faisal Beg, Gavin Weiguang Ding, 2019, Medical Image Anal..

Rapid radial optical coherence tomography image acquisition

Marinko V Sarunic, Mirza Faisal Beg, Evgeniy Lebed, 2013, Journal of biomedical optics.

Muscle segmentation in axial computed tomography (CT) images at the lumbar (L3) and thoracic (T4) levels for body composition analysis

Mirza Faisal Beg, Karteek Popuri, Setareh Dabiri, 2019, Comput. Medical Imaging Graph..

Cascade Dual-branch Deep Neural Networks for Retinal Layer and fluid Segmentation of Optical Coherence Tomography Incorporating Relative Positional Map

Mirza Faisal Beg, Da Ma, Gavin Weiguang Ding, 2020, MIDL.

Construction of MRI-Based Alzheimer's Disease Score Based on Efficient 3D Convolutional Neural Network: Comprehensive Validation on 7,902 Images from a Multi-Center Dataset.

Mirza Faisal Beg, Karteek Popuri, Da Ma, 2020, Journal of Alzheimer's disease : JAD.

On identification of sinoatrial node in zebrafish heart based on functional time series from optical mapping

Mirza Faisal Beg, Gavin Weiguang Ding, Eric Lin, 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

A Combined Surface And VOlumetric Registration (SAVOR) Framework to Study Cortical Biomarkers and Volumetric Imaging Data

Ali R. Khan, Mirza Faisal Beg, Eli Gibson, 2009, MICCAI.

The Euler-Lagrange Equation for Interpolating Sequence of Landmark Datasets

Alain Trouvé, Michael I. Miller, Mirza Faisal Beg, 2003, MICCAI.

Development and validation of a novel dementia of Alzheimer's type (DAT) score based on metabolism FDG-PET imaging

Lei Wang, Mirza Faisal Beg, Karteek Popuri, 2017, NeuroImage: Clinical.

Cascade Dual-branch Deep Neural Networks for Retinal Layer and fluid Segmentation of Optical Coherence Tomography Incorporating Spatial Prior

Mirza Faisal Beg, Morgan Heisler, Marinko V. Sarunic, 2020 .

Progress on machine learning based methods for processing and classification of optical coherence tomography angiography (Conference Presentation)

Mirza Faisal Beg, Sven Lončarić, Morgan Heisler, 2020 .

Retinal Fluid Segmentation and Detection in Optical Coherence Tomography Images using Fully Convolutional Neural Network pdf

Mirza Faisal Beg, Gavin Weiguang Ding, Marinko Sarunic, 2017, ArXiv.

Deep learning vessel segmentation and quantification of the foveal avascular zone using commercial and prototype OCT-A platforms pdf

Sven Loncaric, Mirza Faisal Beg, Pavle Prentasic, 2019, ArXiv.

Surface displacement based shape analysis of central brain structures in preterm-born children

Mirza Faisal Beg, Karteek Popuri, Ruth E. Grunau, 2016, SPIE Medical Imaging.

Morphometric analysis of the optic nerve head with optical coherence tomography

Mirza Faisal Beg, Eli Gibson, Marinko V. Sarunic, 2010, BiOS.

Atlas‐based shape analysis and classification of retinal optical coherence tomography images using the functional shape (fshape) framework

Alain Trouvé, Mirza Faisal Beg, Karteek Popuri, 2017, Medical Image Anal..

Automatic detection of subretinal fluid and sub-retinal pigment epithelium fluid in optical coherence tomography images

Mirza Faisal Beg, Gavin Weiguang Ding, Marinko Sarunic, 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

Microvasculature Segmentation and Intercapillary Area Quantification of the Deep Vascular Complex Using Transfer Learning

Sven Loncaric, Mirza Faisal Beg, Marinko Sarunic, 2020, Translational vision science & technology.

Measuring and Mapping Cardiac Fiber and Laminar Architecture Using Diffusion Tensor MR Imaging

Mirza Faisal Beg, Michael I Miller, Raimond L Winslow, 2005, Annals of the New York Academy of Sciences.

External landmark and head-shape-based functional data normalization

Ali R. Khan, Mirza Faisal Beg, Naznin Virji-Babul, 2009, Comput. Medical Imaging Graph..

End-to-end Pipeline for Spectral Domain Optical Coherence Tomography and Morphometric Analysis of Human Optic Nerve Head

Mirza Faisal Beg, Marinko V. Sarunic, Sieun Lee, 2011 .

Multimodal and Multiscale Deep Neural Networks for the Early Diagnosis of Alzheimer's Disease using structural MR and FDG-PET images

Sterling C. Johnson, Mirza Faisal Beg, Karteek Popuri, 2017, ArXiv.

Representation of time-varying shapes in the large deformation diffeomorphic framework

Ali R. Khan, Mirza Faisal Beg, Ali R. Khan, 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Momentum-based morphometric analysis with application to Parkinson's disease

Martin J. McKeown, Ali R. Khan, Mirza Faisal Beg, 2011, Medical Imaging.

Quantitative Evaluation of Transform Domains for Compressive Sampling-Based Recovery of Sparsely Sampled Volumetric OCT Images

Mirza Faisal Beg, Evgeniy Lebed, Marinko V. Sarunic, 2013, IEEE Transactions on Biomedical Engineering.

Hippocampal Surface Mapping of Genetic Risk Factors in AD via Sparse Learning Models

Michael Weiner, Shannon L. Risacher, Andrew J. Saykin, 2011, MICCAI.

Deep learning method for localization and segmentation of abdominal CT

Mirza Faisal Beg, Karteek Popuri, Setareh Dabiri, 2020, Comput. Medical Imaging Graph..

Computing an average anatomical atlas using LDDMM and geodesic shooting

Ali R. Khan, Mirza Faisal Beg, M. Beg, 2006, 3rd IEEE International Symposium on Biomedical Imaging: Nano to Macro, 2006..

Manually segmented template library for 8-year-old pediatric brain MRI data with 16 subcortical structures

Mirza Faisal Beg, Karteek Popuri, Ruth E. Grunau, 2014, Journal of medical imaging.

RETOUCH: The Retinal OCT Fluid Detection and Segmentation Benchmark and Challenge

Keshab K. Parhi, Ulas Bagci, Jayanthi Sivaswamy, 2019, IEEE Transactions on Medical Imaging.

Topology of Surface Displacement Shape Feature in Subcortical Structures

Mirza Faisal Beg, Karteek Popuri, Donghuan Lu, 2017, GRAIL/MFCA/MICGen@MICCAI.

Two novel methods for computing the 3D cardiac midwall

Mirza Faisal Beg, Ryan Dickie, M. Beg, 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Quantitative assessment of field strength, total intracranial volume, sex, and age effects on the goodness of harmonization for volumetric analysis on the ADNI database

Lei Wang, Mirza Faisal Beg, Karteek Popuri, 2018, Human brain mapping.

Thickness NETwork (ThickNet) Features for the Detection of Prodromal AD

Lei Wang, Mirza Faisal Beg, Pradeep Reddy Raamana, 2013, MLMI.

Real-time high-speed volumetric imaging using compressive sampling optical coherence tomography

Yifan Jian, Mirza Faisal Beg, Evgeniy Lebed, 2011, Biomedical optics express.

Freesurfer-initialized large deformation diffeomorphic metric mapping with application to Parkinson's disease

Martin J. McKeown, Ali R. Khan, Mirza Faisal Beg, 2009, Medical Imaging.

mapping system, with integrated electrocardiogram and programmable

Mirza Faisal Beg, Glen F. Tibbits, Marinko V. Sarunic, 2015 .

Rapid volumetric OCT image acquisition using compressive sampling.

Paul J Mackenzie, Marinko V Sarunic, Mirza Faisal Beg, 2010, Optics express.

SAR and optical image fusion for urban infrastructure detection and monitoring

Mirza Faisal Beg, Bernhard Rabus, Usman Iqbal Ahmed, 2020, Remote Sensing.

Multi-acquisition averaging OCT-A for diabetic retinopathy (Conference Presentation)

Myeong Jin Ju, Yifan Jian, Mirza Faisal Beg, 2019 .

3D hemisphere-based convolutional neural network for whole-brain MRI segmentation

Mirza Faisal Beg, Karteek Popuri, Da Ma, 2021, Comput. Medical Imaging Graph..

LF-UNet - A novel anatomical-aware dual-branch cascaded deep neural network for segmentation of retinal layers and fluid from optical coherence tomography images

Mirza Faisal Beg, Da Ma, Gavin Weiguang Ding, 2021, Comput. Medical Imaging Graph..

Progress on combining OCT-A with deep learning for diabetic retinopathy diagnosis

Mirza Faisal Beg, Da Ma, Marinko V. Sarunic, 2021 .

Comprehensive Validation of Automated Whole Body Skeletal Muscle, Adipose Tissue, and Bone Segmentation from 3D CT images for Body Composition Analysis: Towards Extended Body Composition pdf

Mirza Faisal Beg, Karteek Popuri, Da Ma, 2021, ArXiv.

Spectral Bandwidth Recovery of Optical Coherence Tomography Images using Deep Learning

Mirza Faisal Beg, Da Ma, Marinko Sarunic, 2021, 2021 12th International Symposium on Image and Signal Processing and Analysis (ISPA).

Domain Adaptation via CycleGAN for Retina Segmentation in Optical Coherence Tomography pdf

Mirza Faisal Beg, Ricky T. Q. Chen, Da Ma, 2021, ArXiv.

Differential Diagnosis of Frontotemporal Dementia and Alzheimer's Disease using Generative Adversarial Network pdf

Mirza Faisal Beg, Karteek Popuri, Da Ma, 2021, ArXiv.

Cortical thickness analysis in Alzheimer's onset

Alain Trouvé, Mirza Faisal Beg, Evgeniy Lebed, 2012, Alzheimer's & Dementia.

END-TO-END 3D-CONVOLUTIONAL NEURAL NETWORK FOR PREDICTING CONVERSION FROM MILD COGNITIVE IMPAIRMENT TO ALZHEIMER’S DEMENTIA

Mirza Faisal Beg, Youngmoon Jung, Lei Wang, 2019, Alzheimer's & Dementia.

Neonatal Pain-Related Stress Predicts Cortical Thickness at Age 7 Years in Children Born Very Preterm

Mirza Faisal Beg, Ruth E. Grunau, Todd S. Woodward, 2013, PloS one.

Hippocampal subfield surface deformity in nonsemantic primary progressive aphasia

Lei Wang, Mirza Faisal Beg, Sandra Weintraub, 2015, Alzheimer's & dementia.

Multi-structure whole brain registration and population average

Mirza Faisal Beg, Ali R. Khan, 2009, 2009 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Differential diagnosis among Alzheimer's disease, frontotemporal disease and healthy aging: Comparative study using subcortical features

Lei Wang, Mirza Faisal Beg, Howard Rosen, 2012, Alzheimer's & Dementia.

Unified voxel- and tensor-based morphometry (UVTBM) using registration confidence

Lei Wang, Mirza Faisal Beg, Ali R. Khan, 2015, Neurobiology of Aging.

Quantitative Optical Coherence Tomography Angiography of Radial Peripapillary Capillaries in Glaucoma, Glaucoma Suspect, and Normal Eyes.

Marinko V Sarunic, Mirza Faisal Beg, Dao-Yi Yu, 2016, American journal of ophthalmology.

Thickness network features for prognostic applications in dementia

Michael W. Weiner, Lei Wang, Mirza Faisal Beg, 2015, Neurobiology of Aging.

Longitudinal study of retinal degeneration in a rat using spectral domain optical coherence tomography.

Marinko V Sarunic, Mirza Faisal Beg, Eli Gibson, 2010, Optics express.

Variability of basal ganglia morphology after spatial normalization: Implications for group studies

Martin J. McKeown, Mirza Faisal Beg, Jingyun Chen, 2010 .

Cerebrospinal Fluid Proteins Predict Longitudinal Hippocampal Degeneration in Early-stage Dementia of the Alzheimer Type

Lei Wang, Mirza Faisal Beg, John G. Csernansky, 2012, Alzheimer disease and associated disorders.

Morphological alterations in the caudate, putamen, pallidum, and thalamus in Parkinson's disease

Martin J. McKeown, Mirza Faisal Beg, Karteek Popuri, 2015, Front. Neurosci..

Cortical Geometry Network and Topology Markers for Parkinson's Disease

Mirza Faisal Beg, Karteek Popuri, Donghuan Lu, 2016, 1611.04393.

LONGITUDINAL SEX DIFFERENCES IN GRAY MATTER ATROPHY FOR ALZHEIMER’S DISEASE

Mirza Faisal Beg, Karteek Popuri, Lei Wang, 2019, Alzheimer's & Dementia.

Gray matter changes in asymptomatic C9orf72 and GRN mutation carriers

Mirza Faisal Beg, Karteek Popuri, Mahadev Bhalla, 2018, NeuroImage: Clinical.

Metric distances between hippocampal shapes indicate different rates of change over time in nondemented and demented subjects.

Lei Wang, Mirza Faisal Beg, Elvan Ceyhan, 2012, Current Alzheimer research.

Cross-sectional analysis of anatomical shape change over time via statistics on 4D within-subject flows

Alain Trouvé, Mirza Faisal Beg, Ali R. Khan, 2010 .

Using machine learning to quantify structural MRI neurodegeneration patterns of Alzheimer's disease into dementia score: Independent validation on 8,834 images from ADNI, AIBL, OASIS, and MIRIAD databases

Mirza Faisal Beg, Karteek Popuri, Da Ma, 2020, Human brain mapping.