Bin Xue

发表

Recent Advances in Machine Learning Based Prediction of RNA-protein Interactions.

Amit Sagar, Bin Xue, B. Xue, 2019, Protein and peptide letters.

Integrated Strategy Improves the Prediction Accuracy of miRNA in Large Dataset

Bin Xue, David Lipps, Sree Devineni, 2016, PloS one.

Vladimir N. Uversky, Bin Xue, Aidan Petrovich, 2015, International journal of molecular sciences.

DDOMAIN: Dividing structures into domains using a normalized domain–domain interaction profile

Yaoqi Zhou, Hongyi Zhou, Bin Xue, 2007, Protein science : a publication of the Protein Society.

Supplement for article entitled "MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning bind- ing regions in proteins"

Lukasz Kurgan, Vladimir N. Uversky, Christopher J. Oldfield, 2005 .

Decision-Tree Based Meta-Strategy Improved Accuracy of Disorder Prediction and Identified Novel Disordered Residues Inside Binding Motifs

Bin Xue, Bi Zhao, B. Xue, 2018, International journal of molecular sciences.

CDF it all: Consensus prediction of intrinsically disordered proteins based on various cumulative distribution functions

A Keith Dunker, Christopher J Oldfield, Christopher J. Oldfield, 2009, FEBS letters.

Improving the prediction accuracy of residue solvent accessibility and real‐value backbone torsion angles of proteins by guided‐learning through a two‐layer neural network

Yaoqi Zhou, Bin Xue, Eshel Faraggi, 2009, Proteins.

Viral disorder or disordered viruses: do viral proteins possess unique features?

Christopher J Oldfield, Christopher J. Oldfield, Vladimir N Uversky, 2010, Protein and peptide letters.

Structural disorder in viral proteins.

Sonia Longhi, Lukasz Kurgan, Vladimir N Uversky, 2014, Chemical reviews.

Unfoldomics of human diseases: linking protein intrinsic disorder with diseases

A Keith Dunker, Zoran Obradovic, Slobodan Vucetic, 2009, BMC Genomics.

Intrinsic protein disorder and protein-protein interactions.

Wei-Lun Hsu, Vladimir N. Uversky, Christopher J. Oldfield, 2011, PSB 2011.

Protein tandem repeats - the more perfect, the less structured.

Vladimir N Uversky, Bin Xue, Andrey V Kajava, 2010, The FEBS journal.

Accurate prediction of protein dihedral angles through conditional random field

Shesheng Zhang, Bin Xue, B. Xue, 2013, Frontiers in Biology.

Real‐value prediction of backbone torsion angles

Bin Xue, Yaoqi Zhou, Eshel Faraggi, 2008, Proteins.

Accurate prediction of protein structural classes using functional domains and predicted secondary structure sequences

Xiaoning Qian, Abbas Nowzari-Dalini, Bin Xue, 2012, Journal of biomolecular structure & dynamics.

Sub-classifying disordered proteins by the CH-CDF plot method

A. Keith Dunker, Wei-Lun Hsu, Vladimir N. Uversky, 2012 .

A creature with a hundred waggly tails: intrinsically disordered proteins in the ribosome

Lukasz Kurgan, Zhenling Peng, A. Keith Dunker, 2013, Cellular and Molecular Life Sciences.

Protein tandem repeats – the more perfect, the less structured

Bin Xue, Julien Jorda, J. Jorda, 2010 .

Analysis of structured and intrinsically disordered regions of transmembrane proteins.

A Keith Dunker, Vladimir N Uversky, Bin Xue, 2009, Molecular bioSystems.

A functionally required unfoldome from the plant kingdom: intrinsically disordered N-terminal domains of GRAS proteins are involved in molecular recognition during plant development

A. Keith Dunker, Vladimir N. Uversky, William T. Jones, 2011, Plant Molecular Biology.

How many differentially expressed genes: A perspective from the comparison of genotypic and phenotypic distances.

Bin Xue, Bi Zhao, B. Xue, 2018, Genomics.

More than just tails: intrinsic disorder in histone proteins.

Lukasz Kurgan, Zhenling Peng, Marcin J Mizianty, 2012, Molecular bioSystems.

Improving protein order-disorder classification using charge-hydropathy plots

Fei Huang, A. Keith Dunker, Wei-Lun Hsu, 2014, BMC bioinformatics.

The intrinsic disorder status of the human hepatitis C virus proteome.

Lukasz Kurgan, Vladimir N Uversky, Bin Xue, 2014, Molecular bioSystems.

HSF transcription factor family, heat shock response, and protein intrinsic disorder.

Vladimir N Uversky, Bin Xue, V. Uversky, 2012, Current protein & peptide science.

On the intrinsic disorder status of the major players in programmed cell death pathways

Lukasz Kurgan, Zhenling Peng, Vladimir N Uversky, 2013, F1000Research.

A putative role of the Sup35p C-terminal domain in the cytoskeleton organization during yeast mitosis.

Vladimir N Uversky, Bin Xue, Krishna D Reddy, 2014, Molecular bioSystems.

Disordered Proteinaceous Machines

Lukasz Kurgan, Monika Fuxreiter, Vladimir N. Uversky, 2014, Chemical reviews.

Utilization of protein intrinsic disorder knowledge in structural proteomics.

A Keith Dunker, Christopher J Oldfield, Christopher J. Oldfield, 2013, Biochimica et biophysica acta.

Predicting residue–residue contact maps by a two‐layer, integrated neural‐network method

Bin Xue, Yaoqi Zhou, Eshel Faraggi, 2009, Proteins.

Exceptionally abundant exceptions: comprehensive characterization of intrinsic disorder in all domains of life

Lukasz Kurgan, Jing Yan, Zhenling Peng, 2014, Cellular and Molecular Life Sciences.

Intrinsic disorder in proteins involved in the innate antiviral immunity: another flexible side of a molecular arms race.

Vladimir N Uversky, Bin Xue, V. Uversky, 2014, Journal of molecular biology.

SPINE-D: Accurate Prediction of Short and Long Disordered Regions by a Single Neural-Network Based Method

A Keith Dunker, Vladimir N Uversky, Bin Xue, 2012, Journal of biomolecular structure & dynamics.