T. Fillmore

发表

Multiplexed targeted mass spectrometry assays for prostate cancer-associated urinary proteins

Thomas L. Fillmore, Richard D. Smith, W. Ellis, 2017, Oncotarget.

Antibody‐independent targeted quantification of TMPRSS2‐ERG fusion protein products in prostate cancer

M. Rubin, A. Chinnaiyan, Naoki Kitabayashi, 2014, Molecular oncology.

Analysis of serum total and free PSA using immunoaffinity depletion coupled to SRM: correlation with clinical immunoassay tests.

Scott R. Kronewitter, Richard D. Smith, D. Chan, 2012, Journal of proteomics.

Quantification of mutant SPOP proteins in prostate cancer using mass spectrometry-based targeted proteomics

M. Rubin, J. Mosquera, D. Camp, 2017, Journal of Translational Medicine.

Proteomic Tissue-Based Classifier for Early Prediction of Prostate Cancer Progression

Thomas L. Fillmore, Richard D. Smith, S. Srivastava, 2020, Cancers.

Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation

J. Krischer, M. Gritsenko, B. Webb-Robertson, 2021, Nature Protocols.

Residual tissue repositories as a resource for population-based cancer proteomic studies

Thomas L. Fillmore, Richard D. Smith, M. Gritsenko, 2018, Clinical Proteomics.

Comprehensive Quantitative Analysis of Ovarian and Breast Cancer Tumor Peptidomes

Gordon W. Slysz, Ronald J. Moore, Samuel H. Payne, 2014, Journal of proteome research.

Proteomic Insights into Phycobilisome Degradation, A Selective and Tightly Controlled Process in The Fast-Growing Cyanobacterium Synechococcus elongatus UTEX 2973

Thomas L. Fillmore, Anil K. Shukla, Richard D. Smith, 2019, Biomolecules.

Serum proteomics reveals systemic dysregulation of innate immunity in type 1 diabetes

Qibin Zhang, Thomas O. Metz, Marina A. Gritsenko, 2013, The Journal of experimental medicine.

The AML microenvironment catalyzes a stepwise evolution to gilteritinib resistance.

E. Demir, D. Bottomly, S. McWeeney, 2021, Cancer cell.

A Deep Redox Proteome Profiling Workflow and Its Application to Skeletal Muscle of a Duchene Muscular Dystrophy Model

Ronald J. Moore, Thomas L. Fillmore, W. Qian, 2022, bioRxiv.

Increasing the Separation Capacity of Intact Histone Proteoforms Chromatography Coupling Online Weak Cation Exchange-HILIC to Reversed Phase LC UVPD-HRMS

Mowei Zhou, Jared B Shaw, Ronald J Moore, 2018, Journal of proteome research.

Proteomic analysis reveals down-regulation of surfactant protein B in murine type II pneumocytes infected with influenza A virus.

Thomas L. Fillmore, Richard D. Smith, M. Gritsenko, 2015, Virology.

High-Throughput Large-Scale Targeted Proteomics Assays for Quantifying Pathway Proteins in Pseudomonas putida KT2440

Meagan C. Burnet, Ronald J. Moore, Christopher W. Johnson, 2020, Frontiers in Bioengineering and Biotechnology.

Antibody-free, targeted mass-spectrometric approach for quantification of proteins at low picogram per milliliter levels in human plasma/serum

Ronald J. Moore, Richard D. Smith, D. Camp, 2012, Proceedings of the National Academy of Sciences.

Carrier-Assisted Single-Tube Processing Approach for Targeted Proteomics Analysis of Low Numbers of Mammalian Cells.

Richard D. Smith, W. Qian, Tao Liu, 2018, Analytical chemistry.

Rapidly Assessing the Quality of Targeted Proteomics Experiments Through Monitoring Stable-isotope Labeled Standards

Bryson C Gibbons, Ronald J Moore, Samuel H Payne, 2018, bioRxiv.

Facile carrier-assisted targeted mass spectrometric approach for proteomic analysis of low numbers of mammalian cells

Anil K. Shukla, Richard D. Smith, W. Qian, 2018, Communications Biology.

Sensitive targeted quantification of ERK phosphorylation dynamics and stoichiometry in human cells without affinity enrichment.

Rui Zhao, Tao Liu, Marina A Gritsenko, 2015, Analytical chemistry.

Long-gradient separations coupled with selected reaction monitoring for highly sensitive, large scale targeted protein quantification in a single analysis.

Ronald J Moore, Sudhir Srivastava, Rui Zhao, 2013, Analytical chemistry.

Deep-Dive Targeted Quantification for Ultrasensitive Analysis of Proteins in Nondepleted Human Blood Plasma/Serum and Tissues.

Thomas L. Fillmore, Richard D. Smith, Ehwang Song, 2017, Analytical chemistry.

Analytical platform evaluation for quantification of ERG in prostate cancer using protein and mRNA detection methods

Richard D. Smith, S. Srivastava, D. Camp, 2015, Journal of Translational Medicine.

A highly sensitive targeted mass spectrometric assay for quantification of AGR2 protein in human urine and serum.

Richard D. Smith, D. Chan, D. Camp, 2014, Journal of proteome research.

Targeted quantification of low ng/mL level proteins in human serum without immunoaffinity depletion.

Ronald J. Moore, Richard D. Smith, D. Camp, 2013, Journal of proteome research.

Coupling microdroplet-based sample preparation, multiplexed isobaric labeling, and nanoflow peptide fractionation for deep proteome profiling of tissue microenvironment

James C. Pino, P. Piehowski, J. Jacobs, 2023, bioRxiv.

Plasma protein biomarkers predict both the development of persistent autoantibodies and type 1 diabetes 6 months prior to the onset of autoimmunity: the TEDDY Study

W. Hagopian, J. Toppari, A. Ziegler, 2022, medRxiv.

Targeted Quantification of Phosphorylation Dynamics in the Context of EGFR-MAPK Pathway.

Tao Liu, Marina A Gritsenko, Wei-Jun Qian, 2018, Analytical chemistry.

The AML Microenvironment Catalyzes a Step-Wise Evolution to Gilteritinib Resistance

E. Demir, D. Bottomly, S. McWeeney, 2021 .

Automated Nanoflow Two-Dimensional Reversed-Phase Liquid Chromatography System Enables In-Depth Proteome and Phosphoproteome Profiling of Nanoscale Samples.

Ying Zhu, Ryan T. Kelly, Rui Zhao, 2019, Analytical chemistry.

Targeted brain proteomics uncover multiple pathways to Alzheimer's dementia

Sara Mostafavi, Tujin Shi, Lei Yu, 2018, Annals of neurology.

Effects of delayed NSAID administration after experimental eccentric contraction injury – A cellular and proteomics study

Thomas L. Fillmore, B. Webb-Robertson, T. Clauss, 2017, PloS one.

Mining the human urine proteome for monitoring renal transplant injury.

Richard D. Smith, M. Sarwal, D. Camp, 2016, Kidney international.

Accumulation of Succinyl Coenzyme A Perturbs the Methicillin-Resistant Staphylococcus aureus (MRSA) Succinylome and Is Associated with Increased Susceptibility to Beta-Lactam Antibiotics

F. Cava, P. Fey, J. Adkins, 2021, mBio.

Expediting SRM Assay Development for Large-Scale Targeted Proteomics Experiments

Joseph N. Brown, Ronald J. Moore, Anil K. Shukla, 2014, Journal of proteome research.

Amylases in the Human Vagina

L. Forney, J. Adkins, G. Clair, 2020, mSphere.

A reversed-phase capillary ultra-performance liquid chromatography–mass spectrometry (UPLC-MS) method for comprehensive top-down/bottom-up lipid profiling

Ronald J. Moore, Thomas L. Fillmore, Richard D. Smith, 2012, Analytical and Bioanalytical Chemistry.

18O-Labeled Proteome Reference as Global Internal Standards for Targeted Quantification by Selected Reaction Monitoring-Mass Spectrometry*

Ronald J. Moore, Richard D. Smith, D. Camp, 2011, Molecular & Cellular Proteomics.

18 O-Labeled Proteome Reference as Global Internal Standards for Targeted Quantification by Selected Reaction Monitoring-Mass Spectrometry*

Ronald J. Moore, Thomas L. Fillmore, Richard D. Smith, 2011 .

Targeted Mass Spectrometry Assays for Specific Quantification of Urinary proPSA Isoforms.

Reta Birhanu Kitata, W. Qian, Alvin Y. Liu, 2023, Journal of proteome research.

A Targeted Mass Spectrometric Assay for Reliable Sensitive Hepcidin Quantification

Richard D. Smith, M. Gritsenko, F. Torti, 2019, Scientific Reports.

Targeted proteomic assays for quantitation of proteins identified by proteogenomic analysis of ovarian cancer

Tao Liu, Marina A Gritsenko, Athena A Schepmoes, 2017, Scientific Data.

Addressing the challenge of soil metaproteome complexity by improving metaproteome depth of coverage through two-dimensional liquid chromatography

Meagan C. Burnet, Ronald J. Moore, Stephen J. Callister, 2018, Soil Biology and Biochemistry.

Microscale depletion of high abundance proteins in human biofluids using IgY14 immunoaffinity resin: analysis of human plasma and cerebrospinal fluid

Ronald J. Moore, Richard D. Smith, T. Clauss, 2014, Analytical and Bioanalytical Chemistry.

Capillary Electrophoresis-Nanoelectrospray Ionization-Selected Reaction Monitoring Mass Spectrometry via a True Sheathless Metal-Coated Emitter Interface for Robust and High-Sensitivity Sample Quantification.

Thomas L. Fillmore, K. Tang, Yuqian Gao, 2016, Analytical chemistry.

Leucine Biosynthesis Is Involved in Regulating High Lipid Accumulation in Yarrowia lipolytica

Thomas L. Fillmore, Richard D. Smith, B. Webb-Robertson, 2017, mBio.

Accumulation of Succinyl Coenzyme A Perturbs the Methicillin-Resistant Staphylococcus aureus (MRSA) Succinylome and Is Associated with Increased Susceptibility to Beta-Lactam Antibiotics

F. Cava, P. Fey, J. Adkins, 2021 .

Detection of Head and Neck Cancer Based on Longitudinal Changes in Serum Protein Abundance

S. Srivastava, V. Petyuk, Tao Liu, 2020, Cancer Epidemiology, Biomarkers & Prevention.

A Customizable Flow Injection System for Automated, High Throughput, and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements.

Ronald J. Moore, Thomas L. Fillmore, Richard D. Smith, 2018, Analytical Chemistry.

Quantification of mutant SPOP proteins in prostate cancer using mass spectrometry-based targeted proteomics

Richard D. Smith, M. Rubin, J. Mosquera, 2017, Journal of Translational Medicine.

Plasma protein biomarkers predict the development of persistent autoantibodies and type 1 diabetes 6 months prior to the onset of autoimmunity

Ronald J. Moore, W. Hagopian, M. Rewers, 2023, Cell reports. Medicine.

Proteogenomic insights suggest druggable pathways in endometrial carcinoma.

Matthew A. Wyczalkowski, Ratna R. Thangudu, Ronald J. Moore, 2023, Cancer cell.

GlyQ-IQ: Glycomics Quintavariate-Informed Quantification with High-Performance Computing and GlycoGrid 4D Visualization

Clay D. Hagler, Gordon W. Slysz, Ronald J. Moore, 2014, Analytical chemistry.

Facile carrier-assisted targeted mass spectrometric approach for proteomic analysis of low numbers of mammalian cells

Thomas L. Fillmore, Anil K. Shukla, Richard D. Smith, 2018, Communications Biology.

Analytical platform evaluation for quantification of ERG in prostate cancer using protein and mRNA detection methods

Richard D. Smith, S. Srivastava, D. Camp, 2015, Journal of Translational Medicine.

Long-gradient separations coupled with selected reaction monitoring for highly sensitive, large scale targeted protein quantification in a single analysis.

Ronald J. Moore, Richard D. Smith, D. Camp, 2013, Analytical chemistry.

Effects of delayed NSAID administration after experimental eccentric contraction injury – A cellular and proteomics study

B. Webb-Robertson, T. Clauss, T. Metz, 2017, PloS one.

Yuqian Gao, Xuejiang Guo, Keqi Tang, 2016, Analytical chemistry.

Comprehensive Quantitative Analysis of Ovarian and Breast Cancer Tumor Peptidomes

Gordon W. Slysz, Grant M. Fujimoto, M. Ellis, 2014, Journal of proteome research.

Decrease in multiple complement proteins associated with development of islet autoimmunity and type 1 diabetes

B. Webb-Robertson, S. Onengut-Gumuscu, E. Nakayasu, 2023, iScience.

Decrease in multiple complement protein levels is associated with the development of islet autoimmunity and type 1 diabetes

M. Rewers, S. Rich, B. Webb-Robertson, 2023, medRxiv.