D. Sala

发表

Biasing AlphaFold2 to predict GPCRs and kinases with user-defined functional or structural properties

J. Meiler, D. Sala, Jens Meiler, 2022, bioRxiv.

A protocol for the refinement of NMR structures using simultaneously pseudocontact shift restraints from multiple lanthanide ions

A. Rosato, C. Luchinat, Andrea Giachetti, 2016, Journal of Biomolecular NMR.

Protein structure prediction assisted with sparse NMR data in CASP13

David A. Snyder, C. Sander, Gaohua Liu, 2019, Proteins.

Modeling of protein conformational changes with Rosetta guided by limited experimental data

J. Meiler, H. Mchaourab, Diego del Alamo, 2022, bioRxiv.

A protocol to automatically calculate homo-oligomeric protein structures through the integration of evolutionary constraints and ambiguous contacts derived from solid- or solution-state NMR

Andrea Giachetti, A. Rosato, C. Luchinat, 2019, bioRxiv.

Potassium starvation responses in yeast highlight novel potassium-related functions

Davide Sala, J. A. Carmona, D. Sala, 2015 .

Application of Molecular Dynamics to the Investigation of Metalloproteins Involved in Metal Homeostasis

A. Rosato, F. Musiani, Davide Sala, 2018, European Journal of Inorganic Chemistry.

Targeting in silico GPCR conformations with ultra-large library screening for hit discovery.

J. Meiler, P. Hildebrand, D. Sala, 2023, Trends in pharmacological sciences.

Sampling alternative conformational states of transporters and receptors with AlphaFold2

J. Meiler, H. Mchaourab, Diego del Alamo, 2022, eLife.

Sampling the conformational landscapes of transporters and receptors with AlphaFold2

J. Meiler, H. Mchaourab, Diego del Alamo, 2021, bioRxiv.

TITLE : Sampling alternative conformational states of transporters and receptors with 1 AlphaFold 2 2 3

H. Mchaourab, D. Sala, 2022 .

Investigation of the Iron(II) Release Mechanism of Human H-Ferritin as a Function of pH

A. Rosato, P. Turano, S. Ciambellotti, 2017, J. Chem. Inf. Model..

Influence of aphotic haloclines and euxinia on organic biomarkers and microbial communities in a thalassohaline and alkaline volcanic crater lake

C. Bernard, Davide Sala, C. Leboulanger, 2021, Geobiology.

Dynamical Behavior and Conformational Selection Mechanism of the Intrinsically Disordered Sic1 Kinase-Inhibitor Domain

G. Moro, U. Cosentino, C. Greco, 2020, Life.

A protocol for the refinement of NMR structures using simultaneously pseudocontact shift restraints from multiple lanthanide ions

A. Rosato, C. Luchinat, Davide Sala, 2016, Journal of biomolecular NMR.

Speeding Up the Identification of Cystic Fibrosis Transmembrane Conductance Regulator-Targeted Drugs: An Approach Based on Bioinformatics Strategies and Surface Plasmon Resonance

Alessandro Orro, Luciano Milanesi, Gabriele Trombetti, 2018, Molecules.

Insights into the Dynamics of the Human Zinc Transporter ZnT8 by MD Simulations

Antonio Rosato, Andrea Giachetti, Davide Sala, 2021, J. Chem. Inf. Model..

A protocol to automatically calculate homo-oligomeric protein structures through the integration of evolutionary constraints and NMR ambiguous contacts

A. Rosato, C. Luchinat, L. Cerofolini, 2019, Computational and structural biotechnology journal.

Molecular dynamics simulations of metalloproteins: A folding study of rubredoxin from Pyrococcus furiosus

A. Rosato, Davide Sala, Andrea Giachetti, 2018 .

An atomistic view of the YiiP structural changes upon zinc(II) binding.

A. Rosato, Davide Sala, Andrea Giachetti, 2019, Biochimica et biophysica acta. General subjects.

Modeling conformational states of proteins with AlphaFold.

J. Meiler, H. Mchaourab, D. Sala, 2023, Current opinion in structural biology.