Takahiro Mimori

发表

STR-realigner: a realignment method for short tandem repeat regions

K. Misawa, M. Nagasaki, T. Mimori, 2016, BMC Genomics.

HLA-VBSeq: accurate HLA typing at full resolution from whole-genome sequencing data

J. Yasuda, M. Nagasaki, Y. Yamaguchi-Kabata, 2015, BMC Genomics.

A Bayesian approach for estimating allele-specific expression from RNA-Seq data with diploid genomes

Masao Nagasaki, Kaname Kojima, Naoki Nariai, 2016, BMC Genomics.

TIGAR2: sensitive and accurate estimation of transcript isoform expression with longer RNA-Seq reads

M. Nagasaki, Y. Yamaguchi-Kabata, Y. Kawai, 2014, BMC Genomics.

A statistical variant calling approach from pedigree information and local haplotyping with phase informative reads

Masao Nagasaki, Kaname Kojima, Naoki Nariai, 2013, Bioinform..

Rare variant discovery by deep whole-genome sequencing of 1,070 Japanese individuals

Kengo Kinoshita, Masao Nagasaki, Naoki Nariai, 2015, Nature Communications.

Japonica array: improved genotype imputation by designing a population-specific SNP array with 1070 Japanese individuals

J. Yasuda, M. Nagasaki, Masayuki Yamamoto, 2015, Journal of Human Genetics.

SVEM: A Structural Variant Estimation Method Using Multi-mapped Reads on Breakpoints

Masao Nagasaki, Tetsuo Shibuya, Kaname Kojima, 2014, AlCoB.

A Bayesian approach for estimating allele-specific expression from RNA-Seq data with diploid genomes

M. Nagasaki, Y. Kawai, Kaname Kojima, 2016, BMC Genomics.

CD45+CD326+ Cells are Predictive of Poor Prognosis in Non–Small Cell Lung Cancer Patients

R. Yamashita, M. Nagasaki, M. Tsao, 2019, Clinical Cancer Research.

Genome analyses for the Tohoku Medical Megabank Project towards establishment of personalized healthcare

K. Kinoshita, J. Yasuda, M. Nagasaki, 2018, Journal of biochemistry.

Construction of JRG (Japanese reference genome) with single-molecule real-time sequencing

K. Misawa, J. Yasuda, M. Nagasaki, 2019, Human Genome Variation.

Construction of JRG (Japanese reference genome) with single-molecule real-time sequencing

K. Kinoshita, K. Misawa, J. Yasuda, 2019, Human Genome Variation.

Construction of full-length Japanese reference panel of class I HLA genes with single-molecule, real-time sequencing

K. Kinoshita, K. Misawa, J. Yasuda, 2018, The Pharmacogenomics Journal.

Short tandem repeat number estimation from paired-end reads for multiple individuals by considering coalescent tree

M. Nagasaki, Takanori Hasegawa, Y. Kawai, 2016, BMC Genomics.

HLA-VBSeq: accurate HLA typing at full resolution from whole-genome sequencing data

Masao Nagasaki, Kaname Kojima, Naoki Nariai, 2015, BMC Genomics.

Diagnostic Uncertainty Calibration: Towards Reliable Machine Predictions in Medical Domain pdf

Issei Sato, Takahiro Mimori, Keiko Sasada, 2020, AISTATS.

HLA-VBSeq v2: improved HLA calling accuracy with full-length Japanese class-I panel

M. Nagasaki, K. Tokunaga, Y. Hitomi, 2019, Human Genome Variation.

STR-realigner: a realignment method for short tandem repeat regions

K. Misawa, M. Nagasaki, Y. Kawai, 2016, BMC Genomics.

Estimating copy numbers of alleles from population-scale high-throughput sequencing data

M. Nagasaki, Y. Yamaguchi-Kabata, Y. Kawai, 2015, BMC Bioinformatics.

Maternity Log study: a longitudinal lifelog monitoring and multiomics analysis for the early prediction of complicated pregnancy

K. Kinoshita, R. Yamashita, M. Nagasaki, 2019, BMJ Open.

AP-SKAT: highly-efficient genome-wide rare variant association test

K. Misawa, M. Nagasaki, Takanori Hasegawa, 2016, BMC Genomics.

iSVP: an integrated structural variant calling pipeline from high-throughput sequencing data

Akira Ono, Masao Nagasaki, Kaname Kojima, 2013, BMC Systems Biology.

AP-SKAT: highly-efficient genome-wide rare variant association test

K. Misawa, M. Nagasaki, Takanori Hasegawa, 2016, BMC Genomics.

A statistical variant calling approach from pedigree information and local haplotyping with phase informative reads

Y. Yamaguchi-Kabata, Kaname Kojima, Yukuto Sato, 2013, Bioinform..

Construction of full-length Japanese reference panel of class I HLA genes with single-molecule, real-time sequencing

K. Kinoshita, K. Misawa, J. Yasuda, 2018, The Pharmacogenomics Journal.

HapMonster: A Statistically Unified Approach for Variant Calling and Haplotyping Based on Phase-Informative Reads

Masao Nagasaki, Kaname Kojima, Naoki Nariai, 2014, AlCoB.

Analysis of Genetic Polymorphism of Bitter Taste Receptor TAS2R38 and TAS2R46, and Its Relationship with Eating and Drinking Habits in Japanese ToMMo Subjects.

Kichiya Suzuki, S. Satoh-Kuriwada, M. Komai, 2023, Journal of nutritional science and vitaminology.

TIGAR2: sensitive and accurate estimation of transcript isoform expression with longer RNA-Seq reads

Masao Nagasaki, Naoki Nariai, Takahiro Mimori, 2014, BMC Genomics.

Estimating copy numbers of alleles from population-scale high-throughput sequencing data

Masao Nagasaki, Kaname Kojima, Naoki Nariai, 2015, BMC Bioinformatics.