Chris Mason

SARS-CoV-2 genome diversity at the binding sites of oligonucleotides used for COVID-19 diagnosis

Paweł P. Łabaj, K. Venkateswaran, D. Carraro, 2020, medRxiv.

Minerva: an alignment- and reference-free approach to deconvolve Linked-Reads for metagenomics

C. Mason, I. Hajirasouliha, D. Bezdan, 2017, bioRxiv.

DNA methylation landscapes of 1538 breast cancers reveal a replication-linked clock, epigenomic instability and cis-regulation

Francine E. Garrett-Bakelman, I. Ellis, A. Tanay, 2021, Nature Communications.

A metagenomic DNA sequencing assay that is robust against environmental DNA contamination

M. Suthanthiran, D. Dadhania, M. Salvatore, 2021, bioRxiv.

A Wipe-Based Stool Collection and Preservation Kit for Microbiome Community Profiling

Bodi D Zhang, J. Dudley, Cem Meydan, 2021, bioRxiv.

CAMP: A modular metagenomics analysis system for integrated multi-step data exploration

Pawel P. Labaj, J. Setubal, A. Kahles, 2023, bioRxiv.

The MetaSUB Microbiome Core Analysis Pipeline Enables Large Scale Metagenomic Analysis

Chris Mason, David C Danko, D. Danko, 2020, 2009.12338.

Methods to preserve individual bacteria and microbiome samples for nucleic acid analyses without altering cellular structure or integrity.

W. Thomas, N. Wagner, D. Butler, 2020, Journal of biomolecular techniques : JBT.