Stefano Costanzi

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Predicting the biological activities through QSAR analysis and docking-based scoring.

Santiago Vilar, Stefano Costanzi, S. Vilar, 2012, Methods in molecular biology.

Chapter 18:Structure-based Virtual Screening for Ligands of G Protein-coupled Receptors

Stefano Costanzi, S. Costanzi, 2011 .

Defining the nucleotide binding sites of P2Y receptors using rhodopsin-based homology modeling

Stefano Costanzi, Kenneth A. Jacobson, Andrei A. Ivanov, 2006, J. Comput. Aided Mol. Des..

Nerve Agents: What They Are, How They Work, How to Counter Them.

Stefano Costanzi, John-Hanson Machado, Moriah Mitchell, 2018, ACS chemical neuroscience.

Lists of Chemical Warfare Agents and Precursors from International Nonproliferation Frameworks: Structural Annotation and Chemical Fingerprint Analysis

Stefano Costanzi, Gregory D. Koblentz, Gregory D Koblentz, 2020, J. Chem. Inf. Model..

The GPCR crystallography boom: providing an invaluable source of structural information and expanding the scope of homology modeling.

Stefano Costanzi, Keyun Wang, S. Costanzi, 2014, Advances in experimental medicine and biology.

Ligand and structure-based methodologies for the prediction of the activity of G protein-coupled receptor ligands

Stefano Costanzi, Kenneth A. Jacobson, Irina G. Tikhonova, 2009, J. Comput. Aided Mol. Des..

In Silico screening for agonists and blockers of the β2 adrenergic receptor: Implications of inactive and activated state structures

Santiago Vilar, Stefano Costanzi, S. Vilar, 2012, J. Comput. Chem..

Facilitating adverse drug event detection in pharmacovigilance databases using molecular structure similarity: application to rhabdomyolysis

Carol Friedman, Herbert S. Chase, Raul Rabadan, 2011, J. Am. Medical Informatics Assoc..

Ligand and structure‐based models for the prediction of ligand‐receptor affinities and virtual screenings: Development and application to the β2‐adrenergic receptor

Santiago Vilar, Stefano Costanzi, Joel Karpiak, 2009, J. Comput. Chem..

Influence of the Structural Accuracy of Homology Models on Their Applicability to Docking-Based Virtual Screening: The β2 Adrenergic Receptor as a Case Study

Stefano Costanzi, Austin Cohen, Abigail Danfora, 2019, J. Chem. Inf. Model..

Computational studies to predict or explain G protein coupled receptor polypharmacology.

Stefano Costanzi, Silvia Paoletta, Kenneth A Jacobson, 2014, Trends in pharmacological sciences.

Delineation of the Molecular Mechanisms of Nucleoside Recognition by Cytidine Deaminase through Virtual Screening

Santiago Vilar, Giulio Ferino, Stefano Costanzi, 2011, ChemMedChem.

Modeling G protein-coupled receptors in complex with biased agonists.

Stefano Costanzi, S. Costanzi, 2014, Trends in pharmacological sciences.

In silico analysis of the binding of agonists and blockers to the β2-adrenergic receptor.

Santiago Vilar, Stefano Costanzi, Joel Karpiak, 2011, Journal of molecular graphics & modelling.

Discovery of novel agonists and antagonists of the free fatty acid receptor 1 (FFAR1) using virtual screening.

Stefano Costanzi, Susanne Neumann, Irina G Tikhonova, 2008, Journal of medicinal chemistry.

On the applicability of GPCR homology models to computer-aided drug discovery: a comparison between in silico and crystal structures of the beta2-adrenergic receptor.

Stefano Costanzi, S. Costanzi, 2008, Journal of medicinal chemistry.

Graph analysis of β2 adrenergic receptor structures: a “social network” of GPCR residues

Stefano Costanzi, Michael Black, Samuel Sheftel, 2013, In Silico Pharmacology.

Structure-activity relationships of uridine 5'-diphosphate analogues at the human P2Y6 receptor.

T Kendall Harden, Stefano Costanzi, Kenneth A Jacobson, 2006, Journal of Medicinal Chemistry.

Structural Basis of M3 Muscarinic Receptor Dimer/Oligomer Formation*

Tong Liu, Moritz Heusel, Stefano Costanzi, 2011, The Journal of Biological Chemistry.

Prediction of passive blood-brain partitioning: straightforward and effective classification models based on in silico derived physicochemical descriptors.

Santiago Vilar, Stefano Costanzi, S. Vilar, 2010, Journal of molecular graphics & modelling.

Computational Drug Target Screening through Protein Interaction Profiles

George Hripcsak, Fernanda Borges, Santiago Vilar, 2016, Scientific Reports.

Homology modeling of class a G protein-coupled receptors.

Stefano Costanzi, S. Costanzi, 2012, Methods in molecular biology.

Docking-based virtual screening for ligands of G protein-coupled receptors: not only crystal structures but also in silico models.

Claudio N. Cavasotto, Sharangdhar S. Phatak, Claudio N Cavasotto, 2011, Journal of molecular graphics & modelling.

Modeling G Protein-Coupled Receptors: a Concrete Possibility.

Stefano Costanzi, S. Costanzi, 2010, Chimica oggi.

Application of Monte Carlo-based receptor ensemble docking to virtual screening for GPCR ligands.

Santiago Vilar, Stefano Costanzi, S. Vilar, 2013, Methods in enzymology.

Nucleotide analogues containing 2-oxa-bicyclo[2.2.1]heptane and l-alpha-threofuranosyl ring systems: interactions with P2Y receptors.

T Kendall Harden, Stefano Costanzi, Piet Herdewijn, 2004, Bioorganic & medicinal chemistry.

Evaluation of small-molecule modulators of the luteinizing hormone/choriogonadotropin and thyroid stimulating hormone receptors: structure-activity relationships and selective binding patterns.

Gerd Krause, Stefano Costanzi, Susanne Neumann, 2006, Journal of medicinal chemistry.

Computing Highly Correlated Positions Using Mutual Information and Graph Theory for G Protein-Coupled Receptors

Stefano Costanzi, Carson C. Chow, C. Chow, 2009, PloS one.

2- and 8-alkynyladenosines: conformational studies and docking to human adenosine A3 receptor can explain their different biological behavior.

Stefano Costanzi, Sauro Vittori, Gloria Cristalli, 2003, Journal of molecular graphics & modelling.

Atomistic insights into rhodopsin activation from a dynamic model.

Gerhard Hummer, Robert B Best, Stefano Costanzi, 2008, Journal of the American Chemical Society.

Identification of Residues Important for Agonist Recognition and Activation in GPR40*

Stefano Costanzi, Susanne Neumann, Irina G Tikhonova, 2007, Journal of Biological Chemistry.

Rhodopsin and the others: a historical perspective on structural studies of G protein-coupled receptors.

Stefano Costanzi, Irina G Tikhonova, Kenneth A Jacobson, 2009, Current pharmaceutical design.

A virtual screen for diverse ligands: discovery of selective G protein-coupled receptor antagonists.

Stefano Costanzi, Susanne Neumann, J. Deschamps, 2008, Journal of the American Chemical Society.