Doheon Lee

Doheon Lee, Kwang Hyung Lee, Sunyong Yoo, 2012, The 6th International Conference on Soft Computing and Intelligent Systems, and The 13th International Symposium on Advanced Intelligence Systems.

Identification of temporal association rules from time-series microarray data sets

Doheon Lee, Hojung Nam, Ki Young Lee, 2009, DTMBIO '08.

Patome: a database server for biological sequence annotation and analysis in issued patents and published patent applications

Doheon Lee, Byungwook Lee, Kwang Hyung Lee, 2006, Nucleic Acids Res..

Deep learning-based classification with improved time resolution for physical activities of children

Doheon Lee, Kiseong Kim, Yongwon Jang, 2018, PeerJ.

Identifying prognostic subgroups of luminal-A breast cancer using a deep autoencoder

Doheon Lee, Seunghyun Wang, Doheon Lee, 2020, 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

A Rule-Based Approach Toward Extraction of Interaction Information from Scientific Literature

Doheon Lee, ksbsb ibc, Ming Cheng, 2006 .

Annotating activation/inhibition relationships to protein-protein interactions using gene ontology relations

Doheon Lee, Dongjin Jang, Hasun Yu, 2018, BMC Systems Biology.

A cluster validation index for GK cluster analysis based on relative degree of sharing

Young-Il Kim, Doheon Lee, Dae-Won Kim, 2004, Inf. Sci..

Identification of common coexpression modules based on quantitative network comparison

Doheon Lee, Yousang Jo, Sanghyeon Kim, 2018, BMC Bioinformatics.

Voting Fuzzy k-NN to Predict Protein Subcellular Localization from Normalized Amino Acid Pair Compositions

Jong-Tae Lim, Doheon Lee, Dae-Won Kim, 2005, PAKDD.

BSML: bio-synergy modeling language for multi-component and multi-target analysis

Doheon Lee, Woochang Hwang, Jaejoon Choi, 2013, DTMBIO '13.

Concept embedding to measure semantic relatedness for biomedical information ontologies

Junseok Park, Doheon Lee, Woochang Hwang, 2019, J. Biomed. Informatics.

Inferring disease association using clinical factors in a combinatorial manner and their use in drug repositioning

Doheon Lee, Jinmyung Jung, Doheon Lee, 2013, Bioinform..

Building the process-drug–side effect network to discover the relationship between biological Processes and side effects

Doheon Lee, Min Song, Kwang Hyung Lee, 2011, BMC Bioinformatics.

Mathematical Modeling of Immune Suppression

Doheon Lee, Dokyun Na, Doheon Lee, 2005, ICARIS.

2 – Data Mining

Doheon Lee, 2002 .

Assessing the Quality of Fuzzy Partitions Using Relative Intersection

Young-Il Kim, Doheon Lee, Dae-Won Kim, 2005, IEICE Trans. Inf. Syst..

Development of Efficient Designing Method for Target Specific Probe Sets

Doheon Lee, Sang Yup Lee, Yoo So Young, 2003 .

Determining Direction of Conditional Probabilistic Dependencies between Clusters

Doheon Lee, Kwang-H. Lee, Sungwon Jung, 2007 .

Speed Estimation From a Tri-axial Accelerometer Using Neural Networks

Doheon Lee, Seungchul Shin, K.H. Lee, 2007, 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

A bioinformatics system for searching Co-Occurrence based on Co-Operational Formation with Advanced Method (COCOFAM) pdf

Junseok Park, Sungji Choo, Doheon Lee, 2016, ArXiv.

Learning Rules to Extract Protein Interactions from Biomedical Text

Doheon Lee, Hyung Lee-Kwang, Tu Minh Phuong, 2003, PAKDD.

DTMBIO 2014: International Workshop on Data and Text Mining in Biomedical Informatics

Doheon Lee, Min Song, Hua Xu, 2014, CIKM.

H-CORE: Enabling genome-scale Bayesian analysis of biological systems without prior knowledge

Doheon Lee, Sungwon Jung, Kwang Hyung Lee, 2007, Biosyst..

Fuzzy cluster validation index based on inter-cluster proximity

Doheon Lee, Dae-Won Kim, Kwang Hyung Lee, 2003, Pattern Recognit. Lett..

Inference of combinatorial neuronal synchrony with Bayesian networks

Doheon Lee, Yoonkey Nam, Sungwon Jung, 2010, Journal of Neuroscience Methods.

Fuzzy clustering of categorical data using fuzzy centroids

Doheon Lee, Dae-Won Kim, Kwang Hyung Lee, 2004, Pattern Recognit. Lett..

Architecture of basic building blocks in protein and domain structural interaction networks

Doheon Lee, Jonghwa Bhak, Kwang Hyung Lee, 2005, Bioinform..

Predicting the Absorption Potential of Chemical Compounds Through a Deep Learning Approach

Doheon Lee, Kwang Hyung Lee, Moonshik Shin, 2018, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Complementary Dual Detectors for Effective Classification

Young-Il Kim, Doheon Lee, Kwang Hyung Lee, 2003, ICARIS.

Mining Context-Specific Rules from the Literature for Virtual Human Model Simulation

Doheon Lee, Kyunghyun Park, Kwangmin Kim, 2014, DTMBIO '14.

Enabling Large-Scale Bayesian Network Learning by Preserving Intercluster Directionality

Doheon Lee, Sungwon Jung, Kwang Hyung Lee, 2007, IEICE Trans. Inf. Syst..

Inferring Pathway Activity toward Precise Disease Classification

Doheon Lee, Trey Ideker, Eunjung Lee, 2008, PLoS Comput. Biol..

A method to improve protein subcellular localization prediction by integrating various biological data sources

Doheon Lee, Thai Quang Tung, Doheon Lee, 2009, BMC Bioinformatics.

A new perspective of integrative genome-wide association analysis considering trans eSNP effect

Doheon Lee, Junho Kim, 2010, 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

MKEM: a Multi-level Knowledge Emergence Model for mining undiscovered public knowledge

Doheon Lee, Min Song, Ali Zeeshan Ijaz, 2009, BMC Bioinformatics.

Context-specific functional module based drug efficacy prediction

Doheon Lee, Woochang Hwang, Jaejoon Choi, 2016, BMC Bioinformatics.

What-if Analysis in Biomedical Networks based on Production Rule System

Doheon Lee, Sangwoo Kim, Hasun Yu, 2015, DTMBIO@CIKM.

Bioinformatics Applications Note Gene Expression Rbsdesigner: Software for Designing Synthetic Ribosome Binding Sites That Yields a Desired Level of Protein Expression

Doheon Lee, Dokyun Na, Doheon Lee, 2022 .

Regulatory element discovery using tree-structured models

Doheon Lee, Kwang Hyung Lee, Tu Minh Phuong, 2003, Third IEEE International Conference on Data Mining.

Data and text mining Towards clustering of incomplete microarray data without the use of imputation

Doheon Lee, Dae-Won Kim, Kwang Hyung Lee, 2006 .

Protein

Doheon Lee, Byungwook Lee, Kiheung Kim, 2005, The Lancet.

Integration of Immune Models Using Petri Nets

Doheon Lee, Kwang Hyung Lee, Inho Park, 2004, ICARIS.

SNP@Ethnos: a database of ethnically variant single-nucleotide polymorphisms

Doheon Lee, Sang-Cheol Kim, Sohyun Hwang, 2006, Nucleic Acids Res..

WittyCG: A Web Based Platform for Integrated Cancer Gene Set Test

Doheon Lee, Yongdeuk Hwang, Kwang H. Lee, 2010 .

Exploring molecular links between lymph node invasion and cancer prognosis in human breast cancer

Doheon Lee, Hojung Nam, Sangwoo Kim, 2011, BMC Systems Biology.

Inferring hidden relationships from biological literature with multi-level context terms

Doheon Lee, Min Song, Jaejoon Choi, 2011, DTMBIO '11.

ETM-DB: integrated Ethiopian traditional herbal medicine and phytochemicals database

Doheon Lee, Lemessa Etana Bultum, Assefa Mussa Woyessa, 2019, BMC Complementary and Alternative Medicine.

Identifying Potential Bioactive Compounds of Natural Products by Combining ADMET Prediction Methods

Doheon Lee, Suhyun Ha, Moonshik Shin, 2015, DTMBIO@CIKM.

A Deep Learning-Based Approach for Identifying the Medicinal Uses of Plant-Derived Natural Compounds

Doheon Lee, Sunyong Yoo, Eunjoo Lee, 2020, Frontiers in Pharmacology.

Implementation of the RDA SQL International Standard

Doheon Lee, Myoung Ho Kim, Woo Suk Yang, 1994 .

SigCS base: an integrated genetic information resource for human cerebral stroke

Doheon Lee, Min-Ho Cha, John W. Cole, 2011, BMC Systems Biology.

Discovering biological processes and side effects relationship using the process-drug-side effect network

Doheon Lee, Min Song, Sejoon Lee, 2010, DTMBIO '10.

AIS-Based Bootstrapping of Bayesian Networks for Identifying Protein Energy Route

Doheon Lee, Sungwon Jung, Kyu-il Cho, 2008, ICARIS.

Development of Database Systems by Integrating Heterogeneous Metabolic Databases

Doheon Lee, Sang Yup Lee, Jin Sik Kim, 2002 .

Proceedings of the seventh ACM SIGKDD international conference on Knowledge discovery and data mining, San Francisco, CA, USA, August 26-29, 2001

Doheon Lee, Ramakrishnan Srikant, Foster Provost, 2001, KDD.

AsiDesigner: exon-based siRNA design server considering alternative splicing

Doheon Lee, Young-Chul Choi, Young-Kyu Park, 2008, Nucleic Acids Res..

Coupling effects on turning points of infectious diseases epidemics in scale-free networks

Doheon Lee, Kwang Hyung Lee, Sangyeon Lee, 2017, BMC Bioinformatics.

Session details: Keynote address

Doheon Lee, 2012, DTMBIO '12.

A corpus for plant-chemical relationships in the biomedical domain

Doheon Lee, Hyunju Lee, Hyejin Cho, 2016, BMC Bioinformatics.

Database summarization using fuzzy ISA hierarchies

Doheon Lee, Myoung-Ho Kim, Doheon Lee, 1997, IEEE Trans. Syst. Man Cybern. Part B.

An interactive retrieval system for clinical trial studies with context-dependent protocol elements

Doheon Lee, Seongkuk Park, Sunyong Yoo, 2020, PloS one.

KOREAN SOCIETY FOR BIOINFORMATICS (KSBI)

Doheon Lee, Dongsup Kim, Jong Park, 2006 .

Scalable Workflow System Model Based on Mobile Agents

Doheon Lee, Jeong-Joon Yoo, Dong-Ik Lee, 2001, PRIMA.

Ranking the sequences of fuzzy values

Doheon Lee, Kwang Hyung Lee, Seungsoo Lee, 2004, Inf. Sci..

Accelerating Drug Discovery with an AI-Based Virtual Human System CODA

Doheon Lee, 2020, 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

A novel initialization scheme for the fuzzy c-means algorithm for color clustering

Doheon Lee, Dae-Won Kim, Kwang Hyung Lee, 2004, Pattern Recognit. Lett..

A Fuzzification of the Relational Data Model

Doheon Lee, Yoon-Joon Lee, Hyung Lee-Kwang, 1993, DASFAA.

Context-dependent transcriptional regulations between signal transduction pathways

Doheon Lee, Heesung Shin, Sangwoo Kim, 2011, BMC Bioinformatics.

Reliable data collection in participatory trials to assess digital healthcare apps

Junseok Park, Doheon Lee, Seongkuk Park, 2020, bioRxiv.

Construction of Multi-level Networks Incorporating Molecule, Cell, Organ and Phenotype Properties for Drug-induced Phenotype Prediction

Sungji Choo, Doheon Lee, Sangwoo Kim, 2014, DTMBIO '14.

Prediction of Extracellular Matrix Proteins Based on Distinctive Sequence and Domain Characteristics

Doheon Lee, Yongdeuk Hwang, Eunjung Lee, 2010, J. Comput. Biol..

Mining cancer genes with running-sum statistics

Doheon Lee, Kwang Hyung Lee, Inho Park, 2009, DTMBIO.

A kernel-based subtractive clustering method

Doheon Lee, Dae-Won Kim, Kwang Hyung Lee, 2005, Pattern Recognit. Lett..

Identification of temporal association rules from time-series microarray data set: temporal association rules

Doheon Lee, Hojung Nam, Ki Young Lee, 2008, DTMBIO.

Generation and application of drug indication inference models using typed network motif comparison analysis

Doheon Lee, Min Song, Kwangmin Kim, 2013, BMC Medical Informatics and Decision Making.

Prediction of drugs having opposite effects on disease genes in a directed network

Junseok Park, Sungji Choo, Doheon Lee, 2016, BMC Systems Biology.

Systematic Identification of Context-dependent Conflicting Information in Biological Pathways

Sungji Choo, Doheon Lee, Kyunghyun Park, 2014, DTMBIO '14.

A Fuzzy Relational Data Model and Extended Semantics of Relational Operations

Doheon Lee, Myoung Ho Kim, 1993 .

Discovering context-specific relationships from biological literature by using multi-level context terms

Doheon Lee, Min Song, Kyunghyun Park, 2012, BMC Medical Informatics and Decision Making.

Modeling large S-system using clustering and genetic algorithm

Doheon Lee, Kwang-Hyung Lee, 2005 .

Inferring Gene Regulatory Networks from Microarray Time Series Data Using Transfer Entropy

Doheon Lee, Kwang Hyung Lee, Thai Quang Tung, 2007, Twentieth IEEE International Symposium on Computer-Based Medical Systems (CBMS'07).

Database summarization using fuzzy ISA hierarchies

Doheon Lee, Myoung-Ho Kim, Doheon Lee, 1997, IEEE Trans. Syst. Man Cybern. Part B.

A Study on the Fuzzy Selective Relational Algebra

Doheon Lee, Myoung Ho Kim, Kwang-Hyung Lee, 1992 .

Design of an Automated Functional Testing Tool for Workflow Systems

Doheon Lee, Seongho Lee, 2000 .

Systems Bioinformatics Research Trends

Doheon Lee, Eunjung Lee, 2008 .

Intelligent Navigation of Autonomous Underwater Vehicles for Cage Aquafarm Surveillance

Doheon Lee, Jinsung Lee, Jongan Lee, 2007, 2007 Frontiers in the Convergence of Bioscience and Information Technologies.

Mathematical modeling of translation initiation for the estimation of its efficiency to computationally design mRNA sequences with desired expression levels in prokaryotes

Doheon Lee, Sunjae Lee, Dokyun Na, 2010, BMC Systems Biology.

Fuzzy Continuous Petri Net-Based Approach for Modeling Immune Systems

Doheon Lee, Kwang Hyung Lee, Inho Park, 2005, WIRN/NAIS.

A comparison between continuous categorical emotion responses and Stimulus loudness parameters

Doheon Lee, Densil Cabrera, Sam Ferguson, 2013, IISA 2013.

Special Issue on Artificial Immune Systems

Doheon Lee, Peter J. Bentley, 2009, J. Math. Model. Algorithms.

SoloDel: a probabilistic model for detecting low-frequent somatic deletions from unmatched sequencing data

Doheon Lee, Hojung Nam, Junho Kim, 2015, Bioinform..

DTMBIO 2019: The Thirteenth International Workshop on Data and Text Mining in Biomedical Informatics

Doheon Lee, Ruibin Xi, Hyojung Paik, 2019, CIKM.

Visualization of Zoomable Network for Multi-Compounds and Multi-Targets Analysis

Junseok Park, Doheon Lee, Jaeho Kim, 2014, DTMBIO '14.

Fuzzy branching temporal logic

Doheon Lee, Kwang Hyung Lee, Seong-ick Moon, 2004, IEEE Transactions on Systems, Man, and Cybernetics, Part B (Cybernetics).

Discovering database summaries through refinements of fuzzy hypotheses

Doheon Lee, Myoung-Ho Kim, Doheon Lee, 1994, Proceedings of 1994 IEEE 10th International Conference on Data Engineering.

5’ End Region Sequencing Error Correction using Multi Layer Perceptron; to make longer EST clustering consensus for minor researched case

Doheon Lee, Jin-Ho Kim, Cheol-Goo Hur, 2006 .

Multivariate classification of urine metabolome profiles for breast cancer diagnosis

Younghoon Kim, Doheon Lee, Imhoi Koo, 2009, DTMBIO.

Design of Autonomous Underwater Vehicles for Cage Aquafarms

Doheon Lee, JongAn Lee, MooTaek Roh, 2007, 2007 IEEE Intelligent Vehicles Symposium.

Petri net-based prediction of therapeutic targets that recover abnormally phosphorylated proteins in muscle atrophy

Doheon Lee, Mijin Kwon, Jinmyung Jung, 2018, BMC Systems Biology.

and Control of an Autonomous Unde Q-Learning and Self-organizing Contr

Doheon Lee, Gyeong-Hwan Yoon, 2009 .

Integration of heterogeneous biological data in syntactic and semantic way

Doheon Lee, Kwang H. Lee, Sungwon Jung, 2007 .

Database Systems for Advances Applications

Doheon Lee, Jianzhong Li, Kyu-Young Whang, 2004 .

DTMBIO 2015: International Workshop on Data and Text Mining in Biomedical Informatics

Doheon Lee, Karin M. Verspoor, Min Song, 2015, CIKM.

Path Planning and T racking of an Autonomous Underwater Vehicle using Virtual Way-points

Hyun Myung, Doheon Lee, Dong-Hoon Kim, 2010 .

On cluster validity index for estimation of the optimal number of fuzzy clusters

Doheon Lee, Dae-Won Kim, Kwang Hyung Lee, 2004, Pattern Recognit..

TNMCA: generation and application of network motif based inference models for drug repositioning

Doheon Lee, Min Song, Kwangmin Kim, 2012, DTMBIO '12.

Predicting disease phenotypes based on the molecular networks with Condition-Responsive Correlation

Doheon Lee, Kwang Hyung Lee, Eunjung Lee, 2011, Int. J. Data Min. Bioinform..

Extraction of Developmentally Important Genes from Microarray Data

Doheon Lee, Kwang Hyung Lee, Taewoo Ryu, 2005, J. Adv. Comput. Intell. Intell. Informatics.

Visualizing multifunctional PPI network with Gene Ontology annotation

Doheon Lee, Sangyeon Lee, Doheon Lee, 2019, 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Disease Classification Based on the Activities of Interacting Molecular Modules with Condition-Responsive Correlation

Doheon Lee, Kwang Hyung Lee, Eunjung Lee, 2009, 2009 IEEE International Conference on Bioinformatics and Biomedicine.

A systematic approach to identify therapeutic effects of natural products based on human metabolite information

Doheon Lee, Sunyong Yoo, Kyungrin Noh, 2018, BMC Bioinformatics.

Comparative analysis of the JAK/STAT signaling through erythropoietin receptor and thrombopoietin receptor using a systems approach

Doheon Lee, Inho Park, Eunjung Lee, 2009, BMC Bioinformatics.

DTMBIO workshop summary

Doheon Lee, Shamkant B. Navathe, Min Song, 2010, CIKM '10.

Comparison Of Type-2 Fuzzy Values With Satisfaction Function

Doheon Lee, Kwang Hyung Lee, Seungsoo Lee, 2005, Int. J. Uncertain. Fuzziness Knowl. Based Syst..

Context-specific biological network construction

Doheon Lee, Kwang Hyung Lee, Yousang Jo, 2014, 2014 Joint 7th International Conference on Soft Computing and Intelligent Systems (SCIS) and 15th International Symposium on Advanced Intelligent Systems (ISIS).

Detecting clusters of different geometrical shapes in microarray gene expression data

Doheon Lee, Dae-Won Kim, Kwang Hyung Lee, 2005, Bioinform..

Robust Sound Source Localization considering Similarity of Back-Propagation Signals

Doheon Lee, Sung-Eui Yoon, Jung-Woo Choi, 2020, 2020 IEEE International Conference on Robotics and Automation (ICRA).

Decision Trees for Multiple Abstraction Levels of Data

Doheon Lee, Mina Jeong, Yong-Kwan Won, 2001, CIA.