Michael H. Holmes

Evolution of high-level ethambutol-resistant tuberculosis through interacting mutations in decaprenylphosphoryl-β-D-arabinose biosynthetic and utilization pathway genes

David Alland, Scott N Peterson, R. Fleischmann, 2013, Nature Genetics.

Comparative Genome Sequencing of an Isogenic Pair of USA800 Clinical Methicillin-Resistant Staphylococcus aureus Isolates Obtained before and after Daptomycin Treatment Failure

S. Peterson, D. Boulware, Marcus B. Jones, 2011, Antimicrobial Agents and Chemotherapy.

A bioinformatic filter for improved base-call accuracy and polymorphism detection using the Affymetrix GeneChip® whole-genome resequencing platform

R. Fleischmann, S. Peterson, S. Sunkara, 2007, Nucleic Acids Research.

Whole genome single nucleotide polymorphism based phylogeny of Francisella tularensis and its application to the development of a strain typing assay

Scott N Peterson, R. Fleischmann, S. Peterson, 2009, BMC Microbiology.

Monitoring the Long-Term Molecular Epidemiology of the Pneumococcus and Detection of Potential ‘Vaccine Escape’ Strains

R. Fleischmann, S. Peterson, Jia Liu, 2011, PloS one.

Evolution of high-level ethambutol-resistant tuberculosis through interacting mutations in decaprenylphosphoryl-β-D-arabinose biosynthetic and utilization pathway genes

R. Fleischmann, S. Peterson, D. Alland, 2013, Nature Genetics.