Erin E. Carlson

发表

Abstract P3-06-10: Multiscale modeling of omics data for precision breast cancer treatment

Matthew A Bockol, Krishna R. Kalari, Kevin J. Thompson, 2019, Poster Session Abstracts.

Biological Responses to Engineered Nanomaterials: Needs for the Next Decade

Rigoberto Hernandez, Qiang Cui, Erin E. Carlson, 2015, ACS central science.

Targeted profiling: quantitative analysis of 1H NMR metabolomics data.

Erin E. Carlson, P. Mercier, A. Weljie, 2006, Analytical chemistry.

Biological impact of nanoscale lithium intercalating complex metal oxides to model bacterium B. subtilis.

Erin E. Carlson, R. Hamers, S. Mitchell, 2019, Environmental science. Nano.

Natural products as chemical probes.

Erin E. Carlson, Erin E Carlson, 2010, ACS chemical biology.

Collision-Induced Dissociation Mass Spectrometry: A Powerful Tool for Natural Product Structure Elucidation.

Erin E. Carlson, Andrew R. Johnson, 2015, Analytical chemistry.

Accurate Mass MS/MS/MS Analysis of Siderophores Ferrioxamine B and E1 by Collision-Induced Dissociation Electrospray Mass Spectrometry

Erin E. Carlson, J. Karty, Ashley M. Sidebottom, 2015, Journal of The American Society for Mass Spectrometry.

Silencing cryptic specialized metabolism in Streptomyces by the nucleoid-associated protein Lsr2

Erin E. Carlson, J. Nodwell, M. Elliot, 2019, bioRxiv.

Modified nucleoside triphosphates in bacterial research for in vitro and live-cell applications

Erin E. Carlson, Adeline Espinasse, Hannah K Lembke, 2020, RSC chemical biology.

Requirement of essential Pbp2x and GpsB for septal ring closure in Streptococcus pneumoniae D39

Erin E. Carlson, S. Shaw, M. Winkler, 2013, Molecular microbiology.

Profiling of β-Lactam Selectivity for Penicillin-Binding Proteins in Streptococcus pneumoniae D39

Erin E. Carlson, M. Winkler, H. C. Tsui, 2015, Antimicrobial Agents and Chemotherapy.

Sharing and community curation of mass spectrometry data with GNPS

Erin E. Carlson, Roger G. Linington, Katherine R. Duncan, 2016 .

Searching for epistasis and linkage heterogeneity by correlations of pedigree‐specific linkage scores

Erin E. Carlson, D. Schaid, J. Stanford, 2008, Genetic epidemiology.

A unique catalytic mechanism for UDP-galactopyranose mutase

Erin E. Carlson, L. Kiessling, Michelle Soltero-Higgin, 2004, Nature Structural &Molecular Biology.

Anastrozole has an Association between Degree of Estrogen Suppression and Outcomes in Early Breast Cancer and is a Ligand for Estrogen Receptor α

Erin E. Carlson, Bingshu E. Chen, P. Fasching, 2020, Clinical Cancer Research.

Genetic Polymorphisms in the Long Noncoding RNA MIR2052HG Offer a Pharmacogenomic Basis for the Response of Breast Cancer Patients to Aromatase Inhibitor Therapy.

Krishna R. Kalari, Erin E. Carlson, Bingshu E. Chen, 2016, Cancer research.

Activity-Based Protein Profiling Methods to Study Bacteria: The Power of Small-Molecule Electrophiles.

Erin E. Carlson, Shabnam Sharifzadeh, Joshua D. Shirley, 2019, Current topics in microbiology and immunology.

Evaluation of CYP2D6 and Efficacy of Tamoxifen and Raloxifene in Women Treated for Breast Cancer Chemoprevention: Results from the NSABP P1 and P2 Clinical Trials

Erin E. Carlson, D. Schaid, Yusuke Nakamura, 2011, Clinical Cancer Research.

Chemical tools for selective activity profiling of bacterial penicillin-binding proteins.

Erin E. Carlson, M. Winkler, K. E. Bruce, 2020, Methods in enzymology.

Chemoselective probes for metabolite enrichment and profiling

Erin E. Carlson, B. Cravatt, 2007, Nature Methods.

Mass spectrometry-based assay for the rapid detection of thiol-containing natural products.

Erin E. Carlson, Stacy L. Capehart, 2016, Chemical communications.

Siloxyl ether functionalized resins for chemoselective enrichment of carboxylic acids.

Erin E. Carlson, D. Trader, 2011, Organic Letters.

Chemoselective enrichment for natural products discovery.

Erin E. Carlson, D. Trader, Antoinette Y. Odendaal, 2011, Chemical science.

Enrichment tags for enhanced-resolution profiling of the polar metabolome.

Erin E. Carlson, B. Cravatt, 2007, Journal of the American Chemical Society.

Structure Elucidation of Macrolide Antibiotics Using MSn Analysis and Deuterium Labelling

Erin E. Carlson, Andrew R. Johnson, 2019, Journal of The American Society for Mass Spectrometry.

Pharmacogenomics of aromatase inhibitors in postmenopausal breast cancer and additional mechanisms of anastrozole action

Krishna R. Kalari, Mehrab Ghanat Bari, Erin E. Carlson, 2020, JCI insight.

Harnessing β-Lactam Antibiotics for Illumination of the Activity of Penicillin-Binding Proteins in Bacillus subtilis

Erin E. Carlson, Felix Dempwolff, D. Kearns, 2019, bioRxiv.

Comparison of Bioorthogonal β‐Lactone Activity‐Based Probes for Selective Labeling of Penicillin‐Binding Proteins

Erin E. Carlson, Nathaniel W. Brown, Joshua D. Shirley, 2020, Chembiochem : a European journal of chemical biology.

Novel Electrophilic Scaffold for Imaging of Essential Penicillin-Binding Proteins in Streptococcus pneumoniae.

Erin E. Carlson, M. Winkler, Ozden Kocaoglu, 2017, ACS chemical biology.

Ion Mobility Mass Spectrometry as an Efficient Tool for Identification of Streptorubin B in Streptomyces coelicolor M145.

Erin E. Carlson, R. J. Thomson, R. Thomson, 2020, Journal of natural products.

Negatively-charged helices in the gas phase.

Erin E. Carlson, Jonathan M. Dilger, D. Clemmer, 2014, Chemical Communications.

PANOPLY: A computational method for identification of promising drugs for a patient based on multidimensional data

Kevin J. Thompson, Erin E. Carlson, K. Kalari, 2017 .

Profiling of β-Lactam Selectivity for Penicillin-Binding Proteins in Escherichia coli Strain DC2

Erin E. Carlson, Ozden Kocaoglu, 2015, Antimicrobial Agents and Chemotherapy.

Rational Design of Selective Adenine-Based Scaffolds for Inactivation of Bacterial Histidine Kinases.

Erin E. Carlson, Manibarsha Goswami, Kaelyn E. Wilke, 2017, Journal of medicinal chemistry.

Targeting a highly conserved domain in bacterial histidine kinases to generate inhibitors with broad spectrum activity.

Erin E. Carlson, Conrad A Fihn, 2021, Current opinion in microbiology.

Strong evidence of a genetic determinant for mammographic density, a major risk factor for breast cancer.

Daniel J Schaid, V Shane Pankratz, Celine M Vachon, 2007, Cancer research.

Looks can be deceiving: Bacterial enzymes work through unanticipated mechanism

Erin E. Carlson, Joshua D. Shirley, 2021, Proceedings of the National Academy of Sciences.

Organization of Peptidoglycan Synthesis in Nodes and Separate Rings at Different Stages of Cell Division of Streptococcus pneumoniae

Erin E. Carlson, S. Shaw, M. Winkler, 2020, bioRxiv.

Taming of a superbase for selective phenol desilylation and natural product isolation.

Erin E. Carlson, D. Trader, 2013, The Journal of organic chemistry.

Combined Structural Analysis and Molecular Dynamics Reveal Penicillin-Binding Protein Inhibition Mode with β-Lactones.

Erin E. Carlson, Elizabeth A Ambrose, C. Contreras-Martel, 2022, ACS chemical biology.

Harnessing β-Lactam Antibiotics for Illumination of the Activity of Penicillin-Binding Proteins in Bacillus subtilis

Erin E. Carlson, Felix Dempwolff, D. Kearns, 2019, bioRxiv.

PROFILE: Early Excellence in Physical Organic Chemistry

Erin E. Carlson, 2013 .

Collision‐Induced Dissociation Mass Spectrometry: A Powerful Tool for Natural Product Structure Elucidation

Erin E. Carlson, Andrew R. Johnson, 2015 .

Chemical probes of UDP-galactopyranose mutase.

Erin E. Carlson, L. Kiessling, J. F. May, 2006, Chemistry & biology.

Identification of inhibitors for UDP-galactopyranose mutase.

Erin E. Carlson, L. Kiessling, J. Phillips, 2004, Journal of the American Chemical Society.

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

Kristian Fog Nielsen, Paul Shinn, Dac-Trung Nguyen, 2016, Nature Biotechnology.

Chemoselective hydroxyl group transformation: an elusive target.

Erin E. Carlson, D. Trader, 2012, Molecular bioSystems.

Real-Time Visualization of in Vitro Transcription of a Fluorescent RNA Aptamer: An Experiment for the Upper-Division Undergraduate or First-Year Graduate Laboratory

Erin E. Carlson, Lauren M. Aufdembrink, Katarzyna P. Adamala, 2018, Journal of Chemical Education.

Tiny Things with Enormous Impact: Nanotechnology in the Fight Against Infectious Disease.

Erin E. Carlson, Stephanie L Mitchell, Erin E Carlson, 2018, ACS infectious diseases.

Development of a single culture E. coli expression system for the enzymatic synthesis of fluorinated tyrosine and its incorporation into proteins.

Erin E. Carlson, M. Smanski, Jorden A. Johnson, 2022, Journal of fluorine chemistry.

Enzyme-targeted fluorescent small-molecule probes for bacterial imaging.

Erin E. Carlson, Joshua D. Shirley, Andrew P. Marshall, 2020, Current opinion in chemical biology.

Metformin pharmacogenomics: a genome-wide association study to identify genetic and epigenetic biomarkers involved in metformin anticancer response using human lymphoblastoid cell lines.

Krishna R. Kalari, Erin E. Carlson, K. Kalari, 2016, Human molecular genetics.

PANOPLY: Omics-guided drug prioritization method tailored to an individual patient

Krishna R. Kalari, Kevin J. Thompson, Krishna R Kalari, 2017, bioRxiv.

Genome-wide linkage analyses of hereditary prostate cancer families with colon cancer provide further evidence for a susceptibility locus on 15q11–q14

Erin E. Carlson, D. Schaid, J. Stanford, 2010, European Journal of Human Genetics.

CDC25B partners with PP2A to induce AMPK activation and tumor suppression in triple negative breast cancer

Krishna R. Kalari, Erin E. Carlson, K. Kalari, 2020, NAR cancer.

Plant pigment identification: a classroom and outreach activity

Erin E. Carlson, Antoinette Y. Odendaal, Kathleen C A Garber, 2013 .

A polygenic risk score for breast cancer in women receiving tamoxifen or raloxifene on NSABP P-1 and P-2

Erin E. Carlson, D. Schaid, C. Vachon, 2015, Breast Cancer Research and Treatment.

Deep sequencing across germline genome-wide association study signals relating to breast cancer events in women receiving aromatase inhibitors for adjuvant therapy of early breast cancer.

Krishna R. Kalari, Erin E. Carlson, Bingshu E. Chen, 2019, Pharmacogenetics and genomics.

Dense genome-wide SNP linkage scan in 301 hereditary prostate cancer families identifies multiple regions with suggestive evidence for linkage.

Erin E. Carlson, D. Schaid, J. Stanford, 2009, Human molecular genetics.

Acquired chromosomal anomalies in chronic lymphocytic leukemia patients compared with more than 50,000 quasi-normal participants.

Erin E. Carlson, Sarah C. Nelson, D. Schaid, 2014, Cancer genetics.

New Approaches to Understanding Bacterial Histidine Kinase Activity and Inhibition

Erin E. Carlson, Kaelyn E. Wilke, 2015 .

Improved chemical syntheses of 1- and 5-deazariboflavin.

Erin E. Carlson, L. Kiessling, 2004, The Journal of organic chemistry.

Germline genome-wide association studies in women receiving neoadjuvant chemotherapy with or without bevacizumab

Krishna R. Kalari, Erin E. Carlson, P. Fasching, 2018, Pharmacogenetics and genomics.

SLCO1B1 polymorphisms and plasma estrone conjugates in postmenopausal women with ER+ breast cancer: genome-wide association studies of the estrone pathway

Krishna R. Kalari, Erin E. Carlson, K. Kalari, 2017, Breast Cancer Research and Treatment.

Progress and prospects for small-molecule probes of bacterial imaging.

Erin E. Carlson, Ozden Kocaoglu, 2016, Nature chemical biology.

Genetic variations associated with gemcitabine treatment outcome in pancreatic cancer

Erin E. Carlson, B. Fridley, G. Jenkins, 2016, Pharmacogenetics and genomics.

Contribution of FKBP5 Genetic Variation to Gemcitabine Treatment and Survival in Pancreatic Adenocarcinoma

Erin E. Carlson, B. Fridley, G. Jenkins, 2013, PloS one.

Integrated metabolomics approach facilitates discovery of an unpredicted natural product suite from Streptomyces coelicolor M145.

Erin E. Carlson, Erin E Carlson, Andrew R Johnson, 2013, ACS chemical biology.

2‐Aminobenzothiazoles Inhibit Virulence Gene Expression and Block Polymyxin Resistance in Salmonella enterica

Erin E. Carlson, Manibarsha Goswami, J. F. May, 2020, Chembiochem : a European journal of chemical biology.

Inactivation of Multiple Bacterial Histidine Kinases by Targeting the ATP-Binding Domain

Erin E. Carlson, Samson Francis, Kaelyn E. Wilke, 2014, ACS chemical biology.

All Signals Lost

Erin E. Carlson, Kaelyn E. Wilke, 2013, Science Translational Medicine.

Screening serine/threonine and tyrosine kinase inhibitors for histidine kinase inhibition.

Erin E. Carlson, Kaelyn E. Wilke, Conrad A Fihn, 2018, Bioorganic & medicinal chemistry.

Selective estrogen receptor modulators and pharmacogenomic variation in ZNF423 regulation of BRCA1 expression: individualized breast cancer prevention.

Erin E. Carlson, D. Schaid, Yusuke Nakamura, 2013, Cancer discovery.

Selective Estrogen Receptor Modulators and Pharmacogenomic Variation in ZNF 423 Regulation of BRCA 1 Expression : Individualized Breast Cancer Prevention

Erin E. Carlson, D. Schaid, Yusuke Nakamura, 2013 .

A reinvigorated era of bacterial secondary metabolite discovery.

Erin E. Carlson, A. Sidebottom, 2015, Current opinion in chemical biology.

Streptomyces Volatile Compounds Influence Exploration and Microbial Community Dynamics by Altering Iron Availability

Erin E. Carlson, M. Elliot, Stephanie E. Jones, 2018, mBio.

Anastrozole Aromatase Inhibitor Plasma Drug Concentration Genome‐Wide Association Study: Functional Epistatic Interaction Between SLC38A7 and ALPPL2

Krishna R. Kalari, Erin E. Carlson, K. Kalari, 2019, Clinical pharmacology and therapeutics.

TSPYL5 SNPs: association with plasma estradiol concentrations and aromatase expression.

Erin E. Carlson, D. Schaid, E. Perez, 2013, Molecular endocrinology.

Selective penicillin-binding protein imaging probes reveal substructure in bacterial cell division.

Erin E. Carlson, M. Winkler, Lok-To Sham, 2012, ACS chemical biology.

Mechanistic Studies of Bioorthogonal ATP Analogs for Assessment of Histidine Kinase Autophosphorylation.

Erin E. Carlson, J. Goodpaster, Xuelan Wen, 2020, ACS chemical biology.

Chronic exposure to complex metal oxide nanoparticles elicits rapid resistance in Shewanella oneidensis MR-1

Erin E. Carlson, R. Hamers, C. Haynes, 2019, Chemical science.

Genome-wide linkage scan of prostate cancer Gleason score and confirmation of chromosome 19q

Erin E. Carlson, D. Schaid, J. Stanford, 2007, Human Genetics.

A General Glycomimetic Strategy Yields Non-carbohydrate Inhibitors of Dc-signw

Erin E. Carlson, L. Kiessling, K. Wangkanont, 2022 .

Preferential Binding of Cytochrome c to Anionic Ligand-Coated Gold Nanoparticles: A Complementary Computational and Experimental Approach.

Erin E. Carlson, C. Murphy, R. Hernandez, 2019, ACS nano.

Gender Performance Gaps Across Different Assessment Methods and the Underlying Mechanisms: The Case of Incoming Preparation and Test Anxiety

Samira M. Azarin, Erin E. Carlson, William R. Harcombe, 2019, Front. Educ..

High-level carbapenem tolerance requires antibiotic-induced outer membrane modifications

Erin E. Carlson, Tobias Dörr, V. Cattoir, 2022, PLoS pathogens.

Disarming the virulence arsenal of Pseudomonas aeruginosa by blocking two-component system signaling† †Electronic supplementary information (ESI) available. See DOI: 10.1039/c8sc02496k

Erin E. Carlson, Adeline Espinasse, Manibarsha Goswami, 2018, Chemical science.

ulence arsenal of Pseudomonas aeruginosa by blocking two-component system signaling †

Erin E. Carlson, Adeline Espinasse, 2018 .

Mechanistic insight into inhibition of two-component system signaling.

Erin E. Carlson, Samson Francis, Douglas E Brown, 2013, MedChemComm.

Activity-based probe for histidine kinase signaling.

Erin E. Carlson, Samson Francis, Kaelyn E. Wilke, 2012, Journal of the American Chemical Society.

Aromatase inhibitor-associated bone fractures: a case-cohort GWAS and functional genomics.

Erin E. Carlson, D. Schaid, M. Ellis, 2014, Molecular endocrinology.

Streptomycesvolatile compounds influence exploration and microbial community dynamics by altering iron availability

Erin E. Carlson, M. Elliot, Stephanie E. Jones, 2018 .

Novel heterocyclic trans olefin analogues of N-{4-[4-(2,3-dichlorophenyl)piperazin-1-yl]butyl}arylcarboxamides as selective probes with high affinity for the dopamine D3 receptor.

Erin E. Carlson, Erin E Carlson, Robert R Luedtke, 2005, Journal of medicinal chemistry.

Breast cancer chemoprevention pharmacogenomics: Deep sequencing and functional genomics of the ZNF423 and CTSO genes

Erin E. Carlson, D. Schaid, S. Scherer, 2017, npj Breast Cancer.

Single-nucleotide polymorphism biomarkers of adjuvant anastrozole-induced estrogen suppression in early breast cancer

Krishna R. Kalari, Erin E. Carlson, M. Ellis, 2020, Pharmacogenetics and genomics.

Thiol-ene enabled detection of thiophosphorylated kinase substrates.

Erin E. Carlson, Kathleen C A Garber, 2013, ACS chemical biology.

The PhoPQ two-component system promotes carbapenem tolerance in Enterobacterales

Erin E. Carlson, Tobias Dörr, Trevor Cross, 2021, bioRxiv.

Exploration of the Effects of γ-Phosphate-Modified ATP Analogues on Histidine Kinase Autophosphorylation.

Erin E. Carlson, Adeline Espinasse, Kaelyn E. Wilke, 2018, Biochemistry.

PANOPLY: A computational method for identification of promising drugs for a patient based on multidimensional data

Krishna R. Kalari, Kevin J. Thompson, Erin E. Carlson, 2017 .

Breast cancer chemoprevention pharmacogenomics: Deep sequencing and functional genomics of the ZNF423 and CTSO genes

Krishna R. Kalari, Erin E. Carlson, D. Schaid, 2017, npj Breast Cancer.

Rational Design of Selective Adenine-Based Scaffolds for Inactivation of Bacterial Histidine Kinases.

Erin E. Carlson, Manibarsha Goswami, Kaelyn E. Wilke, 2017, Journal of medicinal chemistry.

Toward the development of solid-supported reagents for separation of alcohol-containing compounds by steric environment

Erin E. Carlson, Darci J. Trader, 2014 .

Novel Electrophilic Scaffold for Imaging of Essential Penicillin-Binding Proteins in Streptococcus pneumoniae.

Erin E. Carlson, M. Winkler, Ozden Kocaoglu, 2017, ACS chemical biology.

Genes associated with serum estrone, estrone conjugates, and androstenedione concentrations in postmenopausal women with estrogen receptor-positive breast cancer.

Krishna R. Kalari, Erin E. Carlson, E. Perez, 2014 .