M. Gonzales

发表

Colinearity of Reverse Transcriptase Inhibitor Resistance Mutations Detected by Population-Based Sequencing

Tomozumi Imamichi, Robert W Shafer, Matthew J Gonzales, 2003, Journal of acquired immune deficiency syndromes.

Human immunodeficiency virus reverse transcriptase and protease sequence database.

Bradley J. Betts, Matthew J. Gonzales, Soo-Yon Rhee, 2003, Nucleic acids research.

Human Immunodeficiency Virus Reverse Transcriptase and Protease Sequence Database: an expanded data model integrating natural language text and sequence analysis programs

Matthew J. Gonzales, Robert W. Shafer, Rami Kantor, 2001, Nucleic Acids Res..

Distribution of Human Immunodeficiency Virus Type 1 Protease and Reverse Transcriptase Mutation Patterns in 4,183 Persons Undergoing Genotypic Resistance Testing

Matthew J. Gonzales, Soo-Yon Rhee, Tommy F. Liu, 2004, Antimicrobial Agents and Chemotherapy.

Panel of prototypical infectious molecular HIV-1 clones containing multiple nucleoside reverse transcriptase inhibitor resistance mutations

R. Shafer, M. Winters, T. Imamichi, 2005, AIDS.

Extended spectrum of HIV-1 reverse transcriptase mutations in patients receiving multiple nucleoside analog inhibitors

Thomas D. Wu, R. Shafer, A. Zolopa, 2003, AIDS.

The Genetic Basis of HIV-1 Resistance to Reverse Transcriptase and Protease Inhibitors.

Rami Kantor, Robert W Shafer, Matthew J Gonzales, 2000, AIDS reviews.

Synonymous-non-synonymous mutation rates between sequences containing ambiguous nucleotides (Syn-SCAN)

Matthew J. Gonzales, Jonathan M. Dugan, Robert W. Shafer, 2002, Bioinform..

Identification of Ugandan HIV type 1 variants with unique patterns of recombination in pol involving subtypes A and D.

R. Shafer, L. Guay, S. Eshleman, 2002, AIDS research and human retroviruses.

Mutation Patterns and Structural Correlates in Human Immunodeficiency Virus Type 1 Protease following Different Protease Inhibitor Treatments

Thomas D. Wu, R. Shafer, C. Schiffer, 2003, Journal of Virology.

Human immunodeficiency virus type 1 reverse-transcriptase and protease subtypes: classification, amino acid mutation patterns, and prevalence in a northern California clinic-based population.

R. Shafer, R W Shafer, R. Machekano, 2001, The Journal of infectious diseases.

Reproducibility of human immunodeficiency virus type 1 (HIV-1) protease and reverse transcriptase sequencing of plasma samples from heavily treated HIV-1-infected individuals.

R. Shafer, M. Winters, A. Warford, 2000, Journal of virological methods.

Lack of detectable human immunodeficiency virus type 1 superinfection during 1072 person-years of observation.

R. Shafer, A. Zolopa, E. Delwart, 2003, The Journal of infectious diseases.