Jakub Otwinowski

Speeding up Evolutionary Search by Small Fitness Fluctuations

Ilya Nemenman, Jakub Otwinowski, Sorin Tanase-Nicola, 2010, Journal of statistical physics.

A totally asymmetric exclusion process with hierarchical long range connections

Stefan Boettcher, Jakub Otwinowski, J. Otwinowski, 2009, 0902.2262.

Direct observation of colloidal aggregation by critical Casimir forces.

Stefano Sacanna, Jakub Otwinowski, Peter Schall, 2009, Physical review letters.

Genotype to Phenotype Mapping and the Fitness Landscape of the E. coli lac Promoter

Ilya Nemenman, Jakub Otwinowski, I. Nemenman, 2012, PloS one.

Clonal competition in B-cell repertoires during chronic HIV-1 infection

Thierry Mora, Aleksandra M Walczak, Jakub Otwinowski, 2018, bioRxiv.

Inferring fitness landscapes by regression produces biased estimates of epistasis

Jakub Otwinowski, Joshua B Plotkin, J. Plotkin, 2014, Proceedings of the National Academy of Sciences.

Fierce Selection and Interference in B-Cell Repertoire Response to Chronic HIV-1

Thierry Mora, Aleksandra M Walczak, Jakub Otwinowski, 2018, Molecular biology and evolution.

Biophysical Inference of Epistasis and the Effects of Mutations on Protein Stability and Function

Jakub Otwinowski, J. Otwinowski, 2018, Molecular biology and evolution.