L. Tripathi

发表

Host-pathogen protein-nucleic acid interactions: A comprehensive review

Lokesh P. Tripathi, R. Nussinov, Shandar Ahmad, 2022, Computational and structural biotechnology journal.

Understanding the biological context of NS5A-host interactions in HCV infection: a network-based approach.

Kenji Mizuguchi, Lokesh P. Tripathi, Toru Okamoto, 2013, Journal of proteome research.

Inhibitory roles of signal transducer and activator of transcription 3 in antitumor immunity during carcinogen-induced lung tumorigenesis.

Kenji Mizuguchi, Lokesh P. Tripathi, Koji Inoue, 2012, Cancer research.

The TargetMine Data Warehouse: Enhancement and Updates

Lokesh P. Tripathi, K. Mizuguchi, Yi-an Chen, 2019, Front. Genet..

Deep Learning Prediction of Adverse Drug Reactions in Drug Discovery Using Open TG–GATEs and FAERS Databases

Kenji Mizuguchi, Lokesh P. Tripathi, Attayeb Mohsen, 2020, Frontiers in Drug Discovery.

Interpreting functional effects of coding variants: challenges in proteome-scale prediction, annotation and assessment

Joel Dudley, Krishna R. Kalari, Khader Shameer, 2016, Briefings Bioinform..

Integrative Network Modeling Highlights the Crucial Roles of Rho-GDI Signaling Pathway in the Progression of non-Small Cell Lung Cancer

Lokesh P. Tripathi, A. Datta, K. Mizuguchi, 2022, IEEE Journal of Biomedical and Health Informatics.

Integrative Analysis Reveals Common and Unique Roles of Tetraspanins in Fibrosis and Emphysema

Lokesh P. Tripathi, K. Mizuguchi, Y. Kondo, 2020, Frontiers in Genetics.

Data Warehousing with TargetMine for Omics Data Analysis.

Kenji Mizuguchi, Yi-An Chen, Lokesh P Tripathi, 2019, Methods in molecular biology.

An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework

Kenji Mizuguchi, Lokesh P. Tripathi, Yi-An Chen, 2016, Database J. Biol. Databases Curation.

Genome-wide survey of prokaryotic serine proteases: Analysis of distribution and domain architectures of five serine protease families in prokaryotes

Lokesh P. Tripathi, R. Sowdhamini, L. Tripathi, 2008, BMC Genomics.

Enhanced function annotations for Drosophila serine proteases: a case study for systematic annotation of multi-member gene families.

Peer Bork, Lokesh P. Tripathi, Lars Juhl Jensen, 2008, Gene.

Proteomic analysis of hepatitis C virus (HCV) core protein transfection and host regulator PA28γ knockout in HCV pathogenesis: a network-based study.

Kenji Mizuguchi, Lokesh P. Tripathi, Yi-An Chen, 2012, Journal of proteome research.

Integrative Analysis of Multi-Omics Data

Kenji Mizuguchi, Lokesh P. Tripathi, Yi-An Chen, 2019, Encyclopedia of Bioinformatics and Computational Biology.

TargetMine, an Integrated Data Warehouse for Candidate Gene Prioritisation and Target Discovery

Lokesh P. Tripathi, K. Mizuguchi, Yi-an Chen, 2011, PloS one.

Congenital acute myeloid leukemia: A rare diagnostic enigma case report with review of literature

J. Shrivastava, K. Mangal, K. Magnani, 2016, South Asian Journal of Cancer.

Cross genome comparisons of serine proteases in Arabidopsis and rice

Lokesh P. Tripathi, R. Sowdhamini, L. Tripathi, 2006, BMC Genomics.

Integrating sequence and gene expression information predicts genome-wide DNA-binding proteins and suggests a cooperative mechanism

Lokesh P. Tripathi, K. Mizuguchi, Shandar Ahmad, 2017, Nucleic acids research.

Network-Based Analysis of Host-Pathogen Interactions

Kenji Mizuguchi, Lokesh P. Tripathi, Yi-An Chen, 2019, Encyclopedia of Bioinformatics and Computational Biology.

Network-Based Analysis for Biological Discovery

Kenji Mizuguchi, Lokesh P. Tripathi, Yi-An Chen, 2019, Encyclopedia of Bioinformatics and Computational Biology.

Double deletion of tetraspanins CD9 and CD81 in mice leads to a syndrome resembling accelerated aging

K. Mizuguchi, E. Mekada, Y. Kondo, 2018, Scientific Reports.

Prediction and experimental validation of a putative non-consensus binding site for transcription factor STAT3 in serum amyloid A gene promoter.

Lokesh P. Tripathi, K. Mizuguchi, Shandar Ahmad, 2013, Biochimica et biophysica acta.

Flavivirus recruits the valosin-containing protein–NPL4 complex to induce stress granule disassembly for efficient viral genome replication

Lokesh P. Tripathi, K. Mizuguchi, T. Ishikawa, 2022, The Journal of biological chemistry.

Classification of idiopathic interstitial pneumonias using anti–myxovirus resistance-protein 1 autoantibody

Kenji Mizuguchi, Lokesh P. Tripathi, Noriyuki Tomiyama, 2017, Scientific Reports.

A combined proteomics and computational approach provides a better understanding of HCV-induced liver disease

Lokesh P. Tripathi, K. Mizuguchi, L. Tripathi, 2012, Expert review of proteomics.

Integrating information from existing databases for enhanced function annotation of genes, genomes and networks

L. Tripathi, 2007, Bioinformation.

Network based analysis of hepatitis C virus core and NS4B protein interactions.

Kenji Mizuguchi, Lokesh P. Tripathi, Yoshiharu Matsuura, 2010, Molecular bioSystems.

Prevalence of HIV Infection among Blood Donors at a Tertiary Care Centre in Gwalior, India

Arun P. Jain, Sunita Rai, D. Sharma, 2015 .

Network analysis and in silico prediction of protein-protein interactions with applications in drug discovery.

Kenji Mizuguchi, Lokesh P. Tripathi, Philip Prathipati, 2017, Current opinion in structural biology.

Female Contribution in Blood Donation and Alternatives: Fact & Factual

Lokesh P. Tripathi, Arun P. Jain, Sunita Rai, 2016 .

Altered Actions of Memantine and NMDA-Induced Currents in a New Grid2-Deleted Mouse Line

Lokesh P. Tripathi, K. Mizuguchi, T. Tabata, 2014, Genes.

Network Modeling and Inference of Peroxisome Proliferator-Activated Receptor Pathway in High fat diet-linked Obesity.

A. Datta, K. Mizuguchi, Haswanth Vundavilli, 2021, Journal of theoretical biology.

Network Modeling and Inference of Peroxisome Proliferator-Activated Receptor Pathway in High fat diet-linked Obesity

Lokesh P. Tripathi, A. Datta, K. Mizuguchi, 2020, bioRxiv.

Integrated Pathway Clusters with Coherent Biological Themes for Target Prioritisation

Kenji Mizuguchi, Lokesh P. Tripathi, Benoit H. Dessailly, 2014, PloS one.

Genome-wide survey of protein families and superfamilies

Lokesh P. Tripathi, R. Sowdhamini, L. Tripathi, 2007 .

CLINE: a web-tool for the comparison of biological dendrogram structures

Kenji Mizuguchi, Lokesh P. Tripathi, Rodolfo S. Allendes Osorio, 2019, BMC Bioinformatics.

Double deletion of tetraspanins CD9 and CD81 in mice leads to a syndrome resembling accelerated aging

Kenji Mizuguchi, Lokesh P. Tripathi, Shohei Koyama, 2018, Scientific Reports.