Răzvan V. Chereji

发表

Mediator binds to boundaries of chromosomal interaction domains and to proteins involved in DNA looping, RNA metabolism, chromatin remodeling, and actin assembly

J. Broach, A. Morozov, Vasudha Bharatula, 2017, Nucleic acids research.

Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast.

A. Hinnebusch, H. Qiu, D. Clark, 2020, Nucleic acids research.

SWI/SNF and RSC cooperate to reposition and evict promoter nucleosomes at highly expressed genes in yeast

A. Hinnebusch, H. Qiu, D. Clark, 2018, Genes & development.

RSC-dependent constructive and destructive interference between opposing arrays of phased nucleosomes in yeast

H. A. Cole, D. Clark, Dwaipayan Ganguli, 2014, Genome research.

A dynamic interplay of nucleosome and Msn2 binding regulates kinetics of gene activation and repression following stress

J. Broach, A. Morozov, Vasudha Bharatula, 2014, Nucleic acids research.

Mechanism of FACT removal from transcribed genes by anticancer drugs curaxins

Jianmin Wang, A. Morozov, M. Kirpichnikov, 2018, Science Advances.

Heavy transcription of yeast genes correlates with differential loss of histone H2B relative to H4 and queued RNA polymerases

H. A. Cole, D. Clark, J. Iben, 2014, Nucleic acids research.

Quantitative MNase-seq accurately maps nucleosome occupancy levels

S. Henikoff, T. Bryson, Răzvan V. Chereji, 2019, Genome Biology.

Precise genome-wide mapping of single nucleosomes and linkers in vivo

Srinivas Ramachandran, Steven Henikoff, Terri D Bryson, 2018, Genome Biology.

MNase-Sensitive Complexes in Yeast: Nucleosomes and Non-histone Barriers.

D. Clark, Josefina Ocampo, Răzvan V. Chereji, 2017, Molecular cell.

Contrasting roles of the RSC and ISW1/CHD1 chromatin remodelers in RNA polymerase II elongation and termination

D. Clark, P. Eriksson, Josefina Ocampo, 2019, Genome research.

tRNA Genes Affect Chromosome Structure and Function via Local Effects

Tetsuya J. Kobayashi, O. Rando, K. Bloom, 2019, Molecular and Cellular Biology.

Transfer RNA Genes Affect Chromosome Structure and Function via Local Effects

Tetsuya J. Kobayashi, O. Rando, K. Bloom, 2018, bioRxiv.

Major Determinants of Nucleosome Positioning.

Răzvan V Chereji, D. Clark, Răzvan V. Chereji, 2018, Biophysical journal.

Gcn4 Binding in Coding Regions Can Activate Internal and Canonical 5' Promoters in Yeast.

Alan G Hinnebusch, A. Hinnebusch, H. Qiu, 2018, Molecular cell.

Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in Drosophila melanogaster

Eugene Berezikov, A. Morozov, V. Guryev, 2015, Nucleic acids research.

Conventional and pioneer modes of glucocorticoid receptor interaction with enhancer chromatin in vivo

G. Hager, Thomas A. Johnson, D. Stavreva, 2017, Nucleic acids research.

The ISW1 and CHD1 ATP-dependent chromatin remodelers compete to set nucleosome spacing in vivo

D. Clark, P. Eriksson, Josefina Ocampo, 2016, Nucleic acids research.

Accessibility of promoter DNA is not the primary determinant of chromatin-mediated gene regulation

D. Clark, P. Eriksson, Josefina Ocampo, 2019, Genome research.

DNA accessibility is not the primary determinant of chromatin-mediated gene regulation

D. Clark, P. Eriksson, Josefina Ocampo, 2019 .

Genome-wide cooperation by HAT Gcn5, remodeler SWI/SNF, and chaperone Ydj1 in promoter nucleosome eviction and transcriptional activation

H. A. Cole, A. Hinnebusch, H. Qiu, 2016, Genome research.

Creating 2D Occupancy Plots Using plot2DO.

P. Beati, Răzvan V. Chereji, 2020, Methods in molecular biology.

Differential nucleosome spacing in neurons and glia

R. Fields, Philip R. Lee, D. Clark, 2020, Neuroscience Letters.

Single-Molecule Analysis Reveals Linked Cycles of RSC Chromatin Remodeling and Ace1p Transcription Factor Binding in Yeast.

J. McNally, David A. Ball, T. Karpova, 2018, Molecular cell.

Statistical Mechanics of Nucleosomes Constrained by Higher-Order Chromatin Structure

A. Morozov, Răzvan V Chereji, Răzvan V. Chereji, 2010, Journal of statistical physics.

Functional roles of nucleosome stability and dynamics.

Alexandre V Morozov, A. Morozov, Răzvan V Chereji, 2015, Briefings in functional genomics.

Statistical mechanics of nucleosome ordering by chromatin-structure-induced two-body interactions.

A. Morozov, Răzvan V Chereji, George Locke, 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.

Ubiquitous nucleosome crowding in the yeast genome

Alexandre V Morozov, A. Morozov, Răzvan V Chereji, 2014, Proceedings of the National Academy of Sciences.

Quantitative MNase-seq accurately maps nucleosome occupancy levels

S. Henikoff, Răzvan V Chereji, T. Bryson, 2019, Genome Biology.

tRNA Genes Affect Chromosome Structure and Function via Local Effects

Tetsuya J. Kobayashi, O. Rando, K. Bloom, 2019, Molecular and Cellular Biology.

SPT6 interacts with NSD2 and facilitates interferon‐induced transcription

K. Ozato, R. Ouda, D. Clark, 2018, FEBS letters.

Functional roles of nucleosome stability and dynamics.

A. Morozov, Răzvan V. Chereji, 2015, Briefings in functional genomics.

Mechanism of FACT removal from transcribed genes by anticancer drugs curaxins

A. Safina, M. Valieva, K. Gurova, 2018, Science Advances.

Gcn4 Binding in Coding Regions Can Activate Internal and Canonical 5' Promoters in Yeast.

A. Hinnebusch, H. Qiu, Josefina Ocampo, 2018, Molecular cell.

Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast.

A. Hinnebusch, H. Qiu, C. Govind, 2020, Nucleic acids research.

Single-Molecule Analysis Reveals Linked Cycles of RSC Chromatin Remodeling and Ace1p Transcription Factor Binding in Yeast.

J. McNally, David A. Ball, T. Karpova, 2018, Molecular cell.