Johan Elf

发表

Stochastic reaction-diffusion simulation with MesoRD

Johan Hattne, David Fange, Johan Elf, 2005, Bioinform..

Staying Clear of the Dragons.

Johan Elf, J. Elf, 2016, Cell systems.

Kinetics in Spatially Extended Systems

Johan Elf, Karsten Kruse, 2006 .

How Will Kinetics and Thermodynamics Inform Our Future Efforts to Understand and Build Biological Systems?

Jean-Loup Faulon, Dimitrios Vavylonis, Polly M. Fordyce, 2017, Cell systems.

MesoRD 1.0: Stochastic reaction-diffusion simulations in the microscopic limit

David Fange, Johan Elf, Anel Mahmutovic, 2012, Bioinform..

Variational algorithms for analyzing noisy multi-state diffusion trajectories

Johan Elf, Martin Lindén, J. Elf, 2018, bioRxiv.

What Makes Ribosome-Mediated Transcriptional Attenuation Sensitive to Amino Acid Limitation?

Måns Ehrenberg, Johan Elf, J. Elf, 2005, PLoS Comput. Biol..

Segmentation and Track-Analysis in Time-Lapse Imaging of Bacteria

Joakim Jaldén, Carolina Wählby, Petter Ranefall, 2016, IEEE Journal of Selected Topics in Signal Processing.

Simulated single molecule microscopy with SMeagol

Vladimir Curic, Alexis Boucharin, David Fange, 2015, Bioinform..

An Evaluation of the Faster STORM Method for Super-resolution Microscopy

Carolina Wählby, Omer Ishaq, Johan Elf, 2014, 2014 22nd International Conference on Pattern Recognition.

Mesoscopic reaction-diffusion in intracellular signaling

Måns Ehrenberg, Johan Elf, Andreas Doncic, 2003, SPIE International Symposium on Fluctuations and Noise.

Variational Algorithms for Analyzing Noisy Multistate Diffusion Trajectories.

Johan Elf, Martin Lindén, J. Elf, 2018, Biophysical journal.

Noise-Induced Min Phenotypes in E. coli

David Fange, Johan Elf, J. Elf, 2006, PLoS Comput. Biol..

Antibiotic susceptibility testing in less than 30 min using direct single-cell imaging

Alexis Boucharin, Johan Elf, J. Elf, 2017, Proceedings of the National Academy of Sciences.

Mesoscopic kinetics and its applications in protein synthesis

Johan Paulsson, Måns Ehrenberg, Johan Elf, 2005 .

In situ genotyping of a pooled strain library after characterizing complex phenotypes

Jimmy Larsson, Michael J. Lawson, David Fange, 2017, bioRxiv.

Fokker–Planck approximation of the master equation in molecular biology

Per Lötstedt, Johan Elf, Paul Sjöberg, 2009 .

Near-critical behavior of aminoacyl-tRNA pools in E. coli at rate-limiting supply of amino acids.

Måns Ehrenberg, Johan Elf, J. Elf, 2005, Biophysical journal.

Effects of macromolecular crowding and DNA looping on gene regulation kinetics

Johan Elf, Gene-Wei Li, J. Elf, 2009 .

The lac Repressor Displays Facilitated Diffusion in Living Cells

Johan Elf, Anel Mahmutovic, J. Elf, 2012, Science.

Delay-induced anomalous fluctuations in intracellular regulation.

Per Lötstedt, Johan Elf, Andreas Grönlund, 2011, Nature communications.

Tracking of individual freely diffusing fluorescent protein molecules in the bacterial cytoplasm

Johan Elf, J. Elf, Brian P. English, 2010, 1003.2110.

Stochastic Modeling of Intracellular Kinetics

Johan Paulsson, Johan Elf, 2006 .

Intracellular Flows and Fluctuations

Johan Elf, J. Elf, 2004 .

Systems biology is taking off.

Jesper Tegnér, Erik Aurell, Rickard Sandberg, 2003, Genome research.

Transcription-factor binding and sliding on DNA studied using micro- and macroscopic models

David van der Spoel, David Fange, Johan Elf, 2013, Proceedings of the National Academy of Sciences.

tRNA tracking for direct measurements of protein synthesis kinetics in live cells

Magnus Johansson, Johan Elf, Martin Lindén, 2018, Nature Chemical Biology.

The Bacterial Toxin RelE Displays Codon-Specific Cleavage of mRNAs in the Ribosomal A Site

Måns Ehrenberg, Johan Elf, J. Elf, 2003, Cell.

Costs and constraints from time-delayed feedback in small gene regulatory motifs

Per Lötstedt, Johan Elf, Andreas Grönlund, 2010, Proceedings of the National Academy of Sciences.

Near-critical phenomena in intracellular metabolite pools.

Johan Paulsson, Måns Ehrenberg, Johan Elf, 2003, Biophysical journal.

Single-Molecule Kinetics in Living Cells.

Johan Elf, Irmeli Barkefors, J. Elf, 2018, Annual review of biochemistry.

In situ genotyping of a pooled strain library after characterizing complex phenotypes

Jimmy Larsson, Michael J. Lawson, David Fange, 2017, Molecular systems biology.

Studying transcriptional interactions in single cells at sufficient resolution.

Johan Elf, J. Elf, M. Walldén, 2011, Current opinion in biotechnology.