Panu Somervuo

发表

Optimal Designs for Microarray Experiments with Biological and Technical Replicates

Rashi Gupta, Panu Somervuo, Sangita Kulathinal, 2008 .

Minimum information required for a DMET experiment reporting.

Jyotishman Pathak, Panu Somervuo, Judit Kumuthini, 2016, Pharmacogenomics.

Classification of the harmonic structure in bird vocalization

Panu Somervuo, Aki Härmä, 2004, 2004 IEEE International Conference on Acoustics, Speech, and Signal Processing.

Self-Organizing Maps and Learning Vector Quantization for Feature Sequences

Panu Somervuo, Teuvo Kohonen, T. Kohonen, 1999, Neural Processing Letters.

Speech Dimensionality Analysis on Hypercubical Self-Organizing Maps

Panu Somervuo, 2004, Neural Processing Letters.

Aligning Reads to Reference

Eija Korpelainen, Panu Somervuo, Garry Wong, 2014 .

Using the self-organizing map to speed up the probability density estimation for speech recognition with mixture density HMMs

Mikko Kurimo, Panu Somervuo, P. Somervuo, 1996, Proceeding of Fourth International Conference on Spoken Language Processing. ICSLP '96.

Author response for "Mathematical and simulation methods for deriving extinction thresholds in spatial and stochastic models of interacting agents"

Panu Somervuo, Otso Ovaskainen, Dmitri Finkelshtein, 2020 .

Comparison of ML, MAP, and VB based acoustic models in large vocabulary speech recognition

Panu Somervuo, 2004, INTERSPEECH.

A general mathematical method for predicting spatio-temporal correlations emerging from agent-based models

Panu Somervuo, Otso Ovaskainen, Dmitri Finkelshtein, 2020, Journal of the Royal Society Interface.

Animal Sound Identifier (ASI): software for automated identification of vocal animals.

Panu Somervuo, Otso Ovaskainen, Ulisses Moliterno de Camargo, 2018, Ecology letters.

Competing hidden Markov models on the self-organizing map

Panu Somervuo, 2000, Proceedings of the IEEE-INNS-ENNS International Joint Conference on Neural Networks. IJCNN 2000. Neural Computing: New Challenges and Perspectives for the New Millennium.

◾ Quantitation and Annotation-Based Quality Control

Eija Korpelainen, Panu Somervuo, Garry Wong, 2014 .

Applications for the hearing-impaired: evaluation of finnish phoneme recognition methods

Toomas Altosaar, Matti Karjalainen, Panu Somervuo, 1997, EUROSPEECH.

Experiments with linear and nonlinear feature transformations in HMM based phone recognition

Panu Somervuo, P. Somervuo, 2003, 2003 IEEE International Conference on Acoustics, Speech, and Signal Processing, 2003. Proceedings. (ICASSP '03)..

Parametric Representations of Bird Sounds for Automatic Species Recognition

Panu Somervuo, Aki Härmä, Seppo Fagerlund, 2006, IEEE Transactions on Audio, Speech, and Language Processing.

Bird song recognition based on syllable pair histograms

Panu Somervuo, Aki Härmä, 2004, 2004 IEEE International Conference on Acoustics, Speech, and Signal Processing.

Online algorithm for the self-organizing map of symbol strings

Panu Somervuo, 2004, Neural Networks.

Time–frequency warping of spectrograms applied to bird sound analyses

Panu Somervuo, P. Somervuo, 2019 .

Two-Level phoneme recognition based on successive use of monophone and diphone models

Panu Somervuo, P. Somervuo, 2002, 2002 11th European Signal Processing Conference.

BARCOSEL: a tool for selecting an optimal barcode set for high-throughput sequencing

Liisa Holm, Panu Somervuo, Petri Auvinen, 2018, BMC Bioinformatics.

Time topology for the self-organizing map

Panu Somervuo, P. Somervuo, 1999, IJCNN'99. International Joint Conference on Neural Networks. Proceedings (Cat. No.99CH36339).

How to make large self-organizing maps for nonvectorial data

Panu Somervuo, Teuvo Kohonen, T. Kohonen, 2002, Neural Networks.

Redundant Hash Addressing of Feature Sequences Using the Self-Organizing Map

Panu Somervuo, 2004, Neural Processing Letters.

SANSparallel: interactive homology search against Uniprot

Liisa Holm, Panu Somervuo, L. Holm, 2015, Nucleic Acids Res..

Unbiased probabilistic taxonomic classification for DNA barcoding

R. Henrik Nilsson, Panu Somervuo, Otso Ovaskainen, 2016, Bioinform..

Feature transformations and combinations for improving ASR performance

Panu Somervuo, Qifeng Zhu, Barry Y. Chen, 2003, INTERSPEECH.

A unified framework for analysis of individual-based models in ecology and beyond

Panu Somervuo, Otso Ovaskainen, Dmitri Finkelshtein, 2019, Nature Communications.

Protax-fungi: a web-based tool for probabilistic taxonomic placement of fungal internal transcribed spacer sequences.

Panu Somervuo, Kessy Abarenkov, Otso Ovaskainen, 2018, The New phytologist.

Self-organizing maps of symbol strings

Panu Somervuo, Teuvo Kohonen, T. Kohonen, 1998, Neurocomputing.

Clustering and Visualization of Large Protein Sequence Databases by Means of an Extension on the Self-Organizing Map

Panu Somervuo, Teuvo Kohonen, T. Kohonen, 2000, Discovery Science.

Data from: PROTAX-fungi: a web-based tool for probabilistic taxonomic placement of fungal ITS sequences

R. Henrik Nilsson, Panu Somervuo, Kessy Abarenkov, 2019 .

PROTAX-Sound: A probabilistic framework for automated animal sound identification

Panu Somervuo, Otso Ovaskainen, Ulisses Moliterno de Camargo, 2017, PloS one.

Speech recognition using temporally connected kernels in mixture density hidden Markov models

Panu Somervuo, 2000, 2000 IEEE International Conference on Acoustics, Speech, and Signal Processing. Proceedings (Cat. No.00CH37100).

Speech modeling using variational Bayesian mixture of Gaussians

Panu Somervuo, 2002, INTERSPEECH.

Abstracts for: 15/9-10

Panu Somervuo, 2002, Neural Networks.

Analyzing Bird Song Syllables on the Self-Organizing Map

Panu Somervuo, Aki Härmä, 2003 .

Self-Organizing Map of Symbol Strings with Smooth Symbol Averaging

Panu Somervuo, P. Somervuo, .

Quantifying uncertainty of taxonomic placement in DNA barcoding and metabarcoding

Douglas W. Yu, Panu Somervuo, Otso Ovaskainen, 2016, bioRxiv.

Preliminary study of ion mobility based electronic nose MGD-1 for discrimination of hard cheeses.

Panu Somervuo, P. Somervuo, T. Alatossava, 2009 .

Clustering of Human Endogenous Retrovirus Sequences with Median Self-Organizing Map

Samuel Kaski, Panu Somervuo, Teuvo Kohonen, 2003 .

The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera

Liisa Holm, Esko Ukkonen, Panu Somervuo, 2014, Nature Communications.

Physiology, Pathology and Relatedness of Human Tissues from Gene Expression Meta-Analysis

Panu Somervuo, Petri Auvinen, Dario Greco, 2008, PloS one.

Carrion fly‐derived DNA metabarcoding is an effective tool for mammal surveys: Evidence from a known tropical mammal community

Douglas W. Yu, Panu Somervuo, W Owen McMillan, 2017, Molecular ecology resources.