Tatiana Nikolskaya

发表

Identifying disease-specific genes based on their topological significance in protein networks

Jeremy Miller, Zoltán Dezsö, Yuri Nikolsky, 2009, BMC Syst. Biol..

Pathway mapping tools for analysis of high content data.

Sean Ekins, Tatiana Nikolskaya, Andrej Bugrim, 2007, Methods in molecular biology.

Knowledge-based analysis of proteomics data

Yuri Nikolsky, Tatiana Nikolskaya, Marina Bessarabova, 2012, BMC Bioinformatics.

Functional analysis of OMICs data and small molecule compounds in an integrated "knowledge-based" platform.

Tatiana Nikolskaya, Yuri Nikolsky, Eugene Kirillov, 2009, Methods in molecular biology.

Integrated network analysis of transcriptomic and proteomic data in psoriasis

Yuri Nikolsky, Tatiana Nikolskaya, Alexander Ishkin, 2010, BMC Systems Biology.

Methodology of Functional Analysis for Omics Data Normalization

Tatiana Nikolskaya, Ally Perlina, Yuri Nikolsky, 2008 .

Effect of training-sample size and classification difficulty on the accuracy of genomic predictors

Leming Shi, Weiwei Shi, Mauro Delorenzi, 2010, Breast Cancer Research.

Computational prediction of human drug metabolism

Sean Ekins, Tatiana Nikolskaya, Andrej Bugrim, 2005, Expert opinion on drug metabolism & toxicology.

Cell type-specific DNA methylation patterns in the human breast

Angel Porgador, Jun Yao, Tatiana Nikolskaya, 2008, Proceedings of the National Academy of Sciences.

A novel method for generation of signature networks as biomarkers from complex high throughput data.

Sean Ekins, Tatiana Nikolskaya, Andrej Bugrim, 2005, Toxicology letters.

Early prediction of drug metabolism and toxicity: systems biology approach and modeling.

Tatiana Nikolskaya, Andrej Bugrim, Yuri Nikolsky, 2004, Drug discovery today.

Functional synergies yet distinct modulators affected by genetic alterations in common human cancers.

Weiwei Shi, Tatiana Nikolskaya, Yuri Nikolsky, 2011, Cancer research.

Modeling of human cytochrome p450-mediated drug metabolism using unsupervised machine learning approach.

Tatiana Nikolskaya, Yuri Nikolsky, Eugene Kirillov, 2003, Journal of medicinal chemistry.

Atherosclerosis and liver inflammation induced by increased dietary cholesterol intake: a combined transcriptomics and metabolomics analysis

Age K Smilde, Ben van Ommen, Jan van der Greef, 2007, Genome Biology.

QUANTITATIVE STRUCTURE-METABOLISM RELATIONSHIP MODELING OF METABOLIC N-DEALKYLATION REACTION RATES

Sean Ekins, Konstantin V. Balakin, Nikolay P. Savchuk, 2004, Drug Metabolism and Disposition.

The Tale of Underlying Biology: Functional Analysis of Multivariant Gene Classifiers (Gene Signatures) in the MAQCII Project

Tatiana Nikolskaya, Yuri Nikolsky, T. Nikolskaya, 2014 .

Proteins that underlie neoplastic progression of ulcerative colitis

Ruedi Aebersold, David R Goodlett, Tatiana Nikolskaya, 2009, Proteomics. Clinical applications.

MudPIT (Multidimensional Protein Identification Technology) for Identification of Post‐Translational Protein Modifications in Complex Biological Mixtures

Tatiana Nikolskaya, Yuri Nikolsky, Stefani N. Thomas, 2006 .

Genome-wide functional synergy between amplified and mutated genes in human breast cancer.

Zoltan Dezso, Wendy Winckler, Jun Yao, 2008, Cancer research.

Prediction of Organ Toxicity Endpoints by QSAR Modeling Based on Precise Chemical‐Histopathology Annotations

Tatiana Nikolskaya, Yuri Nikolsky, Svetlana Bureeva, 2012, Chemical biology & drug design.

KOHONEN MAPS FOR PREDICTION OF BINDING TO HUMAN CYTOCHROME P450 3A4

Sean Ekins, Konstantin V. Balakin, Nikolay P. Savchuk, 2004, Drug Metabolism and Disposition.

Network analysis of human glaucomatous optic nerve head astrocytes

Zoltan Dezso, Tatiana Nikolskaya, Yuri Nikolsky, 2009, BMC medical genomics.

Bimodal gene expression patterns in breast cancer

Weiwei Shi, Tatiana Nikolskaya, Andrej Bugrim, 2010, BMC Genomics.

Biodistribution of doxorubicin and nanostructured ferrocarbon carrier particles in organism during magnetically controlled drug delivery

Boris Ya. Kogan, Tatiana Nikolskaya, T. Nikolskaya, 2009 .

A NOVEL METHOD FOR VISUALIZING NUCLEAR HORMONE RECEPTOR NETWORKS RELEVANT TO DRUG METABOLISM

Sean Ekins, Tatiana Nikolskaya, Eugene Kirillov, 2005, Drug Metabolism and Disposition.

Gene expression profiling of human breast tissue samples using SAGE-Seq.

Clifford A. Meyer, Jun S. Liu, Armin Schwartzman, 2010, Genome research.

Techniques: application of systems biology to absorption, distribution, metabolism, excretion and toxicity.

Sean Ekins, Tatiana Nikolskaya, Yuri Nikolsky, 2005, Trends in pharmacological sciences.

Regulation of in situ to invasive breast carcinoma transition.

Jun Yao, Tatiana Nikolskaya, Yuri Nikolsky, 2008, Cancer cell.

The JAK2/STAT3 signaling pathway is required for growth of CD44⁺CD24⁻ stem cell-like breast cancer cells in human tumors.

Mithat Gönen, Tatiana Nikolskaya, Yuri Nikolsky, 2011, The Journal of clinical investigation.