Panagiotis L Kastritis

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment

Daisuke Kihara, Keehyoung Joo, Daisuke Kuroda, 2016, Proteins.

Community-wide assessment of protein-interface modeling suggests improvements to design methodology.

Kengo Kinoshita, Haruki Nakamura, Genki Terashi, 2011, Journal of molecular biology.

Strengths and weaknesses of data‐driven docking in critical assessment of prediction of interactions

Alexandre M J J Bonvin, Annalisa Bordogna, João P G L M Rodrigues, 2010, Proteins.

Are scoring functions in protein-protein docking ready to predict interactomes? Clues from a novel binding affinity benchmark.

Alexandre M J J Bonvin, Panagiotis L Kastritis, P. Kastritis, 2010, Journal of proteome research.

Non‐interacting surface solvation and dynamics in protein–protein interactions

Alexandre M J J Bonvin, Panagiotis L Kastritis, P. Kastritis, 2015, Proteins.

Explicit treatment of water molecules in data-driven protein-protein docking: the solvated HADDOCKing approach.

Alexandre M J J Bonvin, Panagiotis L Kastritis, P. Kastritis, 2012, Methods in molecular biology.

Solvated protein–protein docking using Kyte‐Doolittle‐based water preferences

Alexandre M J J Bonvin, Panagiotis L Kastritis, P. Kastritis, 2013, Proteins.

Molecular origins of binding affinity: seeking the Archimedean point.

Alexandre M J J Bonvin, Panagiotis L Kastritis, P. Kastritis, 2013, Current opinion in structural biology.