Somasekar Seshagiri

发表

Evaluating the quality of the 1000 Genomes Project data

Saurabh Belsare, Michal Sakin-Levy, Yulia Mostovoy, 2018 .

SCINA: Semi-Supervised Analysis of Single Cells in silico

Somasekar Seshagiri, Wei Guo, Ze Zhang, 2019, bioRxiv.

Genomic variant calling: Flexible tools and a diagnostic data set

Robert Gentleman, Melanie A. Huntley, Somasekar Seshagiri, 2015, bioRxiv.

Venn diagram showing the overlap in the SNP calls made using data from the three sequencing technologies.

Somasekar Seshagiri, Aakrosh Ratan, Stephan C. Schuster, 2013 .

SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples

Wei Guo, Somasekar Seshagiri, Danni Luo, 2019, Genes.

Disruption of PH–kinase domain interactions leads to oncogenic activation of AKT in human cancers

Somasekar Seshagiri, Thomas D. Wu, Jeremy Stinson, 2012, Proceedings of the National Academy of Sciences.

Prediction and Quantification of Splice Events from RNA-Seq Data

Robert Gentleman, Somasekar Seshagiri, Thomas D. Wu, 2016, PloS one.

Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer

Robert Gentleman, Florian Gnad, John D. Minna, 2012, Nature Genetics.

Coevolution of PDZ domain-ligand interactions analyzed by high-throughput phage display and deep sequencing.

Gary D. Bader, Gary D Bader, Somasekar Seshagiri, 2010, Molecular bioSystems.

Comparative oncogenomics identifies PSMB4 and SHMT2 as potential cancer driver genes.

Somasekar Seshagiri, Li Li, Richard Bourgon, 2014, Cancer research.

Bayesian Modeling of the Yeast SH3 Domain Interactome Predicts Spatiotemporal Dynamics of Endocytosis Proteins

Gary D. Bader, Gary D Bader, Somasekar Seshagiri, 2009, PLoS biology.

De-ubiquitination and ubiquitin ligase domains of A20 downregulate NF-κB signalling

Somasekar Seshagiri, L. Aravind, Eugene V. Koonin, 2004, Nature.

Spectrum of diverse genomic alterations define non–clear cell renal carcinoma subtypes

Lisa N Kinch, Nick V Grishin, Na Zhang, 2014, Nature Genetics.

Massively parallel nanowell-based single-cell gene expression profiling

Somasekar Seshagiri, Karthikeyan Swaminathan, Thomas Schaal, 2017, BMC Genomics.

Loss of the Tumor Suppressor BAP1 Causes Myeloid Transformation

Somasekar Seshagiri, Paula Katavolos, Omar Abdel-Wahab, 2012, Science.

Comprehensive analysis of single molecule sequencing-derived complete genome and whole transcriptome of Hyposidra talaca nuclear polyhedrosis virus

Suman Sarkar, Somasekar Seshagiri, Jonas Korlach, 2018, Scientific Reports.

ATM Engages Autodegradation of the E3 Ubiquitin Ligase COP1 After DNA Damage

Somasekar Seshagiri, Vishva M Dixit, S. Seshagiri, 2006, Science.

Rapid Evolution of Functional Complexity in a Domain Family

Gary D Bader, Somasekar Seshagiri, Moyez Dharsee, 2009, Science Signaling.

Evaluating the quality of the 1000 genomes project data

Saurabh Belsare, Pui-Yan Kwok, Somasekar Seshagiri, 2018, BMC Genomics.

The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment.

Somasekar Seshagiri, Yisheng Jin, Patrick Dowd, 2003, Genome research.

A Specificity Map for the PDZ Domain Family

Chris Sander, Gary D Bader, Somasekar Seshagiri, 2008, PLoS biology.

Somatic mutations lead to an oncogenic deletion of met in lung cancer.

Somasekar Seshagiri, Jeremy Stinson, S. Seshagiri, 2006, Cancer research.

Evidence for sequenced molecular evolution of IDH1 mutant glioblastoma from a distinct cell of origin.

Zhaoshi Jiang, Somasekar Seshagiri, Franklin Peale, 2011, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

Oncogenic ERBB3 mutations in human cancers.

Somasekar Seshagiri, Jeremy Stinson, Charles Eigenbrot, 2013, Cancer cell.