T. Ermak

Statistical Potential to Improve Antibody- A ntigen Docking

P. Yakovlev, Timofei Ermak, A. Sadovnikov, 2020 .

Local Algorithms for Minimizing the Force Field for 3D Representation of Macromolecules

A. Gasnikov, A. Anikin, A. Gornov, 2019, Computational Mathematics and Mathematical Physics.

Algorithms for local optimization of OPLS energy for large protein structures

Alexander Gasnikov, Vladimir Morozov, Alexander Gornov, 2018, 1810.03358.

Simple End-to-end Deep Learning Model for CDR-H3 Loop Structure Prediction pdf

Aleksei Shpilman, Natalia Zenkova, Timofei Ermak, 2021, ArXiv.

Bacterial promoter prediction: Selection of dynamic and static physical properties of DNA for reliable sequence classification

Evgenia Zykova, Anatoly Sorokin, Artem Ryasik, 2018, J. Bioinform. Comput. Biol..