Yuri Nikolsky

发表

Protein Networks and Pathway Analysis

Julie Bryant, Yuri Nikolsky, Y. Nikolsky, 2009, Methods in Molecular Biology.

Pathway mapping tools for analysis of high content data.

Sean Ekins, Tatiana Nikolskaya, Andrej Bugrim, 2007, Methods in molecular biology.

Functional analysis of OMICs data and small molecule compounds in an integrated "knowledge-based" platform.

Tatiana Nikolskaya, Yuri Nikolsky, Eugene Kirillov, 2009, Methods in molecular biology.

MetaMiner (CF): a disease-oriented bioinformatics analysis environment.

Yuri Nikolsky, Tatiana Serebryiskaya, Jerry M Wright, 2009, Methods in molecular biology.

Effect of training-sample size and classification difficulty on the accuracy of genomic predictors

Leming Shi, Weiwei Shi, Mauro Delorenzi, 2010, Breast Cancer Research.

Cell type-specific DNA methylation patterns in the human breast

Angel Porgador, Jun Yao, Tatiana Nikolskaya, 2008, Proceedings of the National Academy of Sciences.

A novel method for generation of signature networks as biomarkers from complex high throughput data.

Sean Ekins, Tatiana Nikolskaya, Andrej Bugrim, 2005, Toxicology letters.

Early prediction of drug metabolism and toxicity: systems biology approach and modeling.

Tatiana Nikolskaya, Andrej Bugrim, Yuri Nikolsky, 2004, Drug discovery today.

Functional synergies yet distinct modulators affected by genetic alterations in common human cancers.

Weiwei Shi, Tatiana Nikolskaya, Yuri Nikolsky, 2011, Cancer research.

Modeling of human cytochrome p450-mediated drug metabolism using unsupervised machine learning approach.

Tatiana Nikolskaya, Yuri Nikolsky, Eugene Kirillov, 2003, Journal of medicinal chemistry.

Atherosclerosis and liver inflammation induced by increased dietary cholesterol intake: a combined transcriptomics and metabolomics analysis

Age K Smilde, Ben van Ommen, Jan van der Greef, 2007, Genome Biology.

The Tale of Underlying Biology: Functional Analysis of Multivariant Gene Classifiers (Gene Signatures) in the MAQCII Project

Tatiana Nikolskaya, Yuri Nikolsky, T. Nikolskaya, 2014 .

JARID1B is a luminal lineage-driving oncogene in breast cancer.

Carlos Caldas, Charles J. Vaske, Hanfei Sun, 2014, Cancer cell.

Horizons in nutritional science : The case for strategic international alliances to harness nutritional genomics for public and personal health.

Jean-Daniel Zucker, Peter Morgan, Berthold Koletzko, 2005 .

MudPIT (Multidimensional Protein Identification Technology) for Identification of Post‐Translational Protein Modifications in Complex Biological Mixtures

Tatiana Nikolskaya, Yuri Nikolsky, Stefani N. Thomas, 2006 .

Drug Repositioning through Systematic Mining of Gene Coexpression Networks in Cancer

Yuri Nikolsky, Marina G. Sergeeva, Alexander E. Ivliev, 2016, PloS one.

Genome-wide functional synergy between amplified and mutated genes in human breast cancer.

Zoltan Dezso, Wendy Winckler, Jun Yao, 2008, Cancer research.

Prediction of Organ Toxicity Endpoints by QSAR Modeling Based on Precise Chemical‐Histopathology Annotations

Tatiana Nikolskaya, Yuri Nikolsky, Svetlana Bureeva, 2012, Chemical biology & drug design.

Network analysis of human glaucomatous optic nerve head astrocytes

Zoltan Dezso, Tatiana Nikolskaya, Yuri Nikolsky, 2009, BMC Medical Genomics.

Bimodal gene expression patterns in breast cancer

Weiwei Shi, Tatiana Nikolskaya, Andrej Bugrim, 2010, BMC Genomics.

The AOST miniature Fourier spectrometer for space studies

B. E. Moshkin, Anna Fedorova, Oleg Korablev, 2009 .

Genomic characterization of explant tumorgraft models derived from fresh patient tumor tissue

Yuri Nikolsky, Robin E Everts, Patrick J Richardson, 2012, Journal of Translational Medicine.

Development of a Drug-Response Modeling Framework to Identify Cell Line Derived Translational Biomarkers That Can Predict Treatment Outcome to Erlotinib or Sorafenib

Yuri Nikolsky, Bin Li, William L. Trepicchio, 2015, PloS one.

Techniques: application of systems biology to absorption, distribution, metabolism, excretion and toxicity.

Sean Ekins, Tatiana Nikolskaya, Yuri Nikolsky, 2005, Trends in pharmacological sciences.

Regulation of in situ to invasive breast carcinoma transition.

Jun Yao, Tatiana Nikolskaya, Yuri Nikolsky, 2008, Cancer cell.

Quantitative knowledge-based analysis in compound safety assessment

Yuri Nikolsky, Svetlana Bureeva, Y. Nikolsky, 2011, Expert opinion on drug metabolism & toxicology.

Systems biology approaches to the study of cardiovascular drugs.

Yuri Nikolsky, Robert Kleemann, Y. Nikolsky, 2010, Methods in molecular biology.

The JAK2/STAT3 signaling pathway is required for growth of CD44⁺CD24⁻ stem cell-like breast cancer cells in human tumors.

Mithat Gönen, Tatiana Nikolskaya, Yuri Nikolsky, 2011, The Journal of clinical investigation.

The transcriptomic signature of fasting murine liver

Emiel Ver Loren van Themaat, Yuri Nikolsky, Diederik Wehkamp, 2008, BMC Genomics.