Yuhang Zhang

发表

Gene Expression Difference Between Primary and Metastatic Renal Cell Carcinoma Using Patient-Derived Xenografts

Xiaoyong Pan, Tao Huang, Yang Jiang, 2019, IEEE Access.

Predicting RNA 5-Methylcytosine Sites by Using Essential Sequence Features and Distributions

Tao Huang, Lei Chen, Zhandong Li, 2022, BioMed research international.

Tissue Expression Difference between mRNAs and lncRNAs

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, International journal of molecular sciences.

Discriminating cirRNAs from other lncRNAs using a hierarchical extreme learning machine (H-ELM) algorithm with feature selection

Xiaoyong Pan, Lei Chen, Tao Huang, 2017, Zeitschrift für Induktive Abstammungs- und Vererbungslehre.

Identification of synthetic lethality based on a functional network by using machine learning algorithms

Lin Lu, Min Liu, Lei Chen, 2018, Journal of cellular biochemistry.

Screening Dys-Methylation Genes and Rules for Cancer Diagnosis by Using the Pan-Cancer Study

Tao Huang, Tao Zeng, Xiaoyong Pan, 2020, IEEE Access.

Identification of leukemia stem cell expression signatures through Monte Carlo feature selection strategy and support vector machine

Lei Chen, Tao Huang, Yu-Dong Cai, 2019, Cancer Gene Therapy.

Identification of leukemia stem cell expression signatures through Monte Carlo feature selection strategy and support vector machine

Xiangyin Kong, Tao Huang, Lei Chen, 2019, Cancer Gene Therapy.

Identifying the Immunological Gene Signatures of Immune Cell Subtypes

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, BioMed Research International.

Identifying the Signatures and Rules of Circulating Extracellular MicroRNA for Distinguishing Cancer Subtypes

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, Frontiers in Genetics.

Identification of Candidate Genes Related to Inflammatory Bowel Disease Using Minimum Redundancy Maximum Relevance, Incremental Feature Selection, and the Shortest-Path Approach

Yu-Dong Cai, Xiangyin Kong, Yu-Hang Zhang, 2017, BioMed research international.

Lung proteomic biomarkers associated with chronic obstructive pulmonary disease

E. Silverman, R. Moritz, R. Bueno, 2021, medRxiv.

Identification of gene expression signatures across different types of neural stem cells with the Monte‐Carlo feature selection method

Lei Chen, Tao Huang, Yu-Dong Cai, 2018, Journal of cellular biochemistry.

Identifying Infliximab- (IFX-) Responsive Blood Signatures for the Treatment of Rheumatoid Arthritis

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021 .

Identify Key Sequence Features to Improve CRISPR sgRNA Efficacy

Jialiang Yang, Lei Chen, Tao Huang, 2017, IEEE Access.

Mining for genes related to choroidal neovascularization based on the shortest path algorithm and protein interaction information.

Yu-Hang Zhang, Wencong Lu, Xun Xu, 2016, Biochimica et biophysica acta.

Identification of COVID-19 Infection-Related Human Genes Based on a Random Walk Model in a Virus–Human Protein Interaction Network

Tao Zeng, Yu-Dong Cai, Tao Huang, 2020, BioMed research international.

Determination of Genes Related to Uveitis by Utilization of the Random Walk with Restart Algorithm on a Protein–Protein Interaction Network

Yuhang Zhang, Lei Chen, Lei Chen, 2017, International journal of molecular sciences.

Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer

Yu-Dong Cai, Yu-Hang Zhang, Shaopeng Wang, 2016, BioMed research international.

Recognizing Pattern and Rule of Mutation Signatures Corresponding to Cancer Types

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, Frontiers in Cell and Developmental Biology.

Computational method for identifying malonylation sites by using random forest algorithm.

Tao Huang, Yu-Hang Zhang, ShaoPeng Wang, 2020, Combinatorial chemistry & high throughput screening.

Identification of Genes Associated with Breast Cancer Metastasis to Bone on a Protein-Protein Interaction Network with a Shortest Path Algorithm.

Yu-Dong Cai, Tao Huang, Lei Chen, 2017, Journal of proteome research.

Identification of Gene Signatures and Expression Patterns During Epithelial-to-Mesenchymal Transition From Single-Cell Expression Atlas

Xiangtian Yu, Yu-Dong Cai, Tao Huang, 2021, Frontiers in Genetics.

Classification of Widely and Rarely Expressed Genes with Recurrent Neural Network

Yu-Dong Cai, Tao Huang, Lei Chen, 2018, Computational and structural biotechnology journal.

Identification of Novel Lung Cancer Driver Genes Connecting Different Omics Levels With a Heat Diffusion Algorithm

Tao Huang, Lei Chen, Yu-Hang Zhang, 2022, Frontiers in Cell and Developmental Biology.

Identification of Microbiota Biomarkers With Orthologous Gene Annotation for Type 2 Diabetes

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, Frontiers in Microbiology.

Analysis of cancer-related lncRNAs using gene ontology and KEGG pathways

Tao Huang, Lei Chen, Yu-Hang Zhang, 2017, Artif. Intell. Medicine.

Identifying circulating miRNA biomarkers for early diagnosis and monitoring of lung cancer.

Yu-Hang Zhang, Xiangyin Kong, Yu-Hang Zhang, 2020, Biochimica et biophysica acta. Molecular basis of disease.

Immunosignature Screening for Multiple Cancer Subtypes Based on Expression Rule

Lei Chen, XiaoYong Pan, Tao Zeng, 2019, Front. Bioeng. Biotechnol..

Deciphering the Relationship between Obesity and Various Diseases from a Network Perspective

Yu-Dong Cai, Tao Huang, Lei Chen, 2017, Genes.

Identification of Differentially Expressed Genes between Original Breast Cancer and Xenograft Using Machine Learning Algorithms

Lei Chen, Tao Huang, Yu-Dong Cai, 2018, Genes.

Mining for Candidate Genes Related to Pancreatic Cancer Using Protein-Protein Interactions and a Shortest Path Approach

Xiangyin Kong, Yu-Hang Zhang, Shaopeng Wang, 2015, BioMed research international.

Gene expression profiling gut microbiota in different races of humans

Lei Chen, Tao Huang, Yu-Hang Zhang, 2016, Scientific Reports.

Screening gene signatures for clinical response subtypes of lung transplantation

Tao Zeng, Tao Huang, Lei Chen, 2022, Molecular Genetics and Genomics.

Prediction and analysis of essential genes using the enrichments of gene ontology and KEGG pathways

Yu-Dong Cai, Tao Huang, Lei Chen, 2017, PloS one.

HIV infection alters the human epigenetic landscape

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, Gene Therapy.

Gene expression differences among different MSI statuses in colorectal cancer

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, International journal of cancer.

Identifying Robust Microbiota Signatures and Interpretable Rules to Distinguish Cancer Subtypes

Tao Zeng, Yu-Dong Cai, Tao Huang, 2020, Frontiers in Molecular Biosciences.

Screening of Methylation Signature and Gene Functions Associated With the Subtypes of Isocitrate Dehydrogenase-Mutation Gliomas

Tao Zeng, Yu-Dong Cai, Tao Huang, 2019, Front. Bioeng. Biotechnol..

Inferring Novel Tumor Suppressor Genes with a Protein-Protein Interaction Network and Network Diffusion Algorithms

Lei Chen, Tao Huang, Yu-Dong Cai, 2018, Molecular therapy. Methods & clinical development.

Predicting Human Protein Subcellular Locations by Using a Combination of Network and Function Features

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, Frontiers in Genetics.

A Computational Method for Classifying Different Human Tissues with Quantitatively Tissue-Specific Expressed Genes

Lei Chen, Tao Huang, Yu-Dong Cai, 2018, Genes.

Identification of Genes Associated with the Impairment of Olfactory and Gustatory Functions in COVID-19 via Machine-Learning Methods

Tao Huang, Kaiyan Feng, Yunpeng Cai, 2023, Life.

Identifying Methylation Pattern and Genes Associated with Breast Cancer Subtypes

Xiaoyong Pan, Lei Chen, Tao Huang, 2019, International journal of molecular sciences.

Copy Number Variation Pattern for Discriminating MACROD2 States of Colorectal Cancer Subtypes

Tao Zeng, Yu-Dong Cai, Tao Huang, 2019, Front. Bioeng. Biotechnol..

Identification of the copy number variant biomarkers for breast cancer subtypes

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, Molecular Genetics and Genomics.

Identifying novel protein phenotype annotations by hybridizing protein–protein interactions and protein sequence similarities

Yu-Dong Cai, Tao Huang, Lei Chen, 2016, Molecular Genetics and Genomics.

Analysis of the chemical toxicity effects using the enrichment of Gene Ontology terms and KEGG pathways.

Q. Zou, Lei Chen, Yu-Hang Zhang, 2016, Biochimica et biophysica acta.

Analysis of four types of leukemia using Gene Ontology term and Kyoto Encyclopedia of Genes and Genomes pathway enrichment scores.

Yu-Dong Cai, Tao Huang, Yu-Hang Zhang, 2020, Combinatorial chemistry & high throughput screening.

Tissue differences revealed by gene expression profiles of various cell lines

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, Journal of cellular biochemistry.

Discriminating Origin Tissues of Tumor Cell Lines by Methylation Signatures and Dys-Methylated Rules

Tao Zeng, Yu-Dong Cai, Tao Huang, 2020, Frontiers in Bioengineering and Biotechnology.

Identification of transcription factors that may reprogram lung adenocarcinoma

Chenglin Liu, Tao Huang, Yudong Cai, 2017, Artif. Intell. Medicine.

Identifying and analyzing different cancer subtypes using RNA-seq data of blood platelets

Lei Chen, Tao Huang, Xiangyin Kong, 2017, Oncotarget.

The Use of Gene Ontology Term and KEGG Pathway Enrichment for Analysis of Drug Half-Life

Yu-Dong Cai, Xiangyin Kong, Tao Huang, 2016, PloS one.

Analysis and Identification of Aptamer-Compound Interactions with a Maximum Relevance Minimum Redundancy and Nearest Neighbor Algorithm

Jing Lu, Yu-Dong Cai, Yu-Hang Zhang, 2016, BioMed research international.

Identifying COVID-19-Specific Transcriptomic Biomarkers with Machine Learning Methods

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, BioMed research international.

Identifying Lung Cancer Cell Markers with Machine Learning Methods and Single-Cell RNA-Seq Data

Tao Huang, Lei Chen, Yu-Hang Zhang, 2021, Life.

Identification of Candidate Genes Related to Renal Carcinoma using Protein Interactions and Structures

Jian Zhang, Tao Huang, Lei Chen, 2022 .

Identification of Pan-Cancer Biomarkers Based on the Gene Expression Profiles of Cancer Cell Lines

Yu-Dong Cai, Tao Huang, Lei Chen, 2021, Frontiers in Cell and Developmental Biology.

Network-Based Method for Identifying Co-Regeneration Genes in Bone, Dentin, Nerve and Vessel Tissues

Yu-Dong Cai, Xiangyin Kong, Tao Huang, 2017, Genes.

Data mining of the cancer-related lncRNAs GO terms and KEGG pathways by using mRMR method.

Lin Lu, Yu-Dong Cai, Fei Yuan, 2018, Mathematical biosciences.

A Shortest-Path-Based Method for the Analysis and Prediction of Fruit-Related Genes in Arabidopsis thaliana

Lei Chen, Tao Huang, Yu-Dong Cai, 2016, PloS one.

Distinguishing Glioblastoma Subtypes by Methylation Signatures

Tao Zeng, Yu-Dong Cai, Tao Huang, 2020, Frontiers in Genetics.

Alternative Polyadenylation Modification Patterns Reveal Essential Posttranscription Regulatory Mechanisms of Tumorigenesis in Multiple Tumor Types

Tao Zeng, Yu-Dong Cai, Tao Huang, 2020, BioMed research international.

Discriminating cirRNAs from other lncRNAs using a hierarchical extreme learning machine (H-ELM) algorithm with feature selection

Yu-Dong Cai, Tao Huang, Lei Chen, 2018, Molecular Genetics and Genomics.

Identification of the copy number variant biomarkers for breast cancer subtypes

Yu-Dong Cai, Tao Huang, Lei Chen, 2018, Molecular Genetics and Genomics.

Identification of the Gene Expression Rules That Define the Subtypes in Glioma

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, Journal of clinical medicine.

New computational tool based on machine-learning algorithms for the identification of rhinovirus infection-related genes.

Xiaoyong Pan, Tao Huang, Yu-Dong Cai, 2019, Combinatorial chemistry & high throughput screening.

Identifying Transcriptomic Signatures and Rules for SARS-CoV-2 Infection

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, Frontiers in Cell and Developmental Biology.

Identification of the core regulators of the HLA I-peptide binding process

Tao Huang, Yu-Dong Cai, Xiangyin Kong, 2017, Scientific Reports.

Investigating gene methylation signatures for fetal intolerance prediction

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, PloS one.

Analysis of Gene Expression Differences between Different Pancreatic Cells

Yu-Dong Cai, Tao Huang, Lei Chen, 2019, ACS Omega.

Identification of protein–protein interaction associated functions based on gene ontology and KEGG pathway

Fei Huang, Tao Huang, Yu-Hang Zhang, 2022, Frontiers in Genetics.

Detecting the Multiomics Signatures of Factor-Specific Inflammatory Effects on Airway Smooth Muscles

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, Frontiers in Genetics.

Investigating the gene expression profiles of cells in seven embryonic stages with machine learning algorithms.

Yu-Dong Cai, Tao Huang, Lei Chen, 2020, Genomics.

Analysis of Expression Pattern of snoRNAs in Different Cancer Types with Machine Learning Algorithms

Lei Chen, Tao Huang, Yu-Dong Cai, 2019, International journal of molecular sciences.

Identifying anal and cervical tumorigenesis-associated methylation signaling with machine learning methods

Fei Huang, Tao Huang, Yu-Hang Zhang, 2022, Frontiers in Oncology.

Analysis of Gene Expression Profiles in the Human Brain Stem, Cerebellum and Cerebral Cortex

Chen Chu, Changming Zhu, Lei Chen, 2016, PloS one.

Identification of novel candidate drivers connecting different dysfunctional levels for lung adenocarcinoma using protein-protein interactions and a shortest path approach

Yu-Dong Cai, Tao Huang, Lei Chen, 2016, Scientific Reports.

Analysis of the Sequence Characteristics of Antifreeze Protein

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, Life.

Investigation and Prediction of Human Interactome Based on Quantitative Features

Kaiyan Feng, Tao Huang, Lei Chen, 2020, Frontiers in Bioengineering and Biotechnology.

Analysis and prediction of drug–drug interaction by minimum redundancy maximum relevance and incremental feature selection

Lai Wei, Lei Chen, Tao Huang, 2017, Journal of biomolecular structure & dynamics.

Identification of compound–protein interactions through the analysis of gene ontology, KEGG enrichment for proteins and molecular fragments of compounds

Tao Huang, Yu-Dong Cai, Yu-Hang Zhang, 2016, Molecular Genetics and Genomics.

Identifying Essential Signature Genes and Expression Rules Associated With Distinctive Development Stages of Early Embryonic Cells

Tao Huang, Tao Zeng, Xiaoyong Pan, 2019, IEEE Access.

Predicting gene phenotype by multi-label multi-class model based on essential functional features

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, Molecular Genetics and Genomics.

Identiﬁcation of Genes Associated with the Impairment of Olfactory and Gustatory Functions in COVID-19 via Machine-Learning Methods

Tao Huang, Kaiyan Feng, Yunpeng Cai, 2022 .

Identifying the RNA signatures of coronary artery disease from combined lncRNA and mRNA expression profiles.

Tao Zeng, Yu-Dong Cai, Tao Huang, 2020, Genomics.

Subcellular Localization Prediction of Human Proteins Using Multifeature Selection Methods

Tao Huang, Lei Chen, Yu-Hang Zhang, 2022, BioMed research international.

Identification of cortical interneuron cell markers in mouse embryos based on machine learning analysis of single-cell transcriptomics

Tao Huang, Lei Chen, Yu-Hang Zhang, 2022, Frontiers in neuroscience.

Determining protein-protein functional associations by functional rules based on gene ontology and KEGG pathway.

Tao Zeng, Yu-Dong Cai, Tao Huang, 2021, Biochimica et biophysica acta. Proteins and proteomics.

A computational method using the random walk with restart algorithm for identifying novel epigenetic factors

Yu-Dong Cai, Xiangyin Kong, Tao Huang, 2018, Molecular Genetics and Genomics.

Analysis of Protein–Protein Functional Associations by Using Gene Ontology and KEGG Pathway

Yu-Dong Cai, Tao Huang, Lei Chen, 2019, BioMed research international.

Inferring novel genes related to oral cancer with a network embedding method and one-class learning algorithms

Yu-Dong Cai, Tao Huang, Lei Chen, 2019, Gene Therapy.

Tao Huang, Yu-Dong Cai, Yu-Hang Zhang, 2017, BioMed research international.

Identifying Cell-Type Specific Genes and Expression Rules Based on Single-Cell Transcriptomic Atlas Data

Tao Zeng, Yu-Dong Cai, Tao Huang, 2020, Frontiers in Bioengineering and Biotechnology.

Primary Tumor Site Specificity is Preserved in Patient-Derived Tumor Xenograft Models

Xiaohua Hu, Xiaoyong Pan, Lei Chen, 2019, Front. Genet..

Inferring novel genes related to oral cancer with a network embedding method and one-class learning algorithms

Yu-Dong Cai, Tao Huang, Lei Chen, 2019, Gene Therapy.

Identifying novel protein phenotype annotations by hybridizing protein–protein interactions and protein sequence similarities

Yu-Dong Cai, Tao Huang, Lei Chen, 2016, Molecular Genetics and Genomics.

Analysis of cancer-related lncRNAs using gene ontology and KEGG pathways

Yu-Dong Cai, Tao Huang, Lei Chen, 2017, Artif. Intell. Medicine.