Trinh-Trung-Duong Nguyen

TNFPred: identifying tumor necrosis factors using hybrid features based on word embeddings

Yu-Yen Ou, Nguyen-Quoc-Khanh Le, Trinh-Trung-Duong Nguyen, 2019, BMC Medical Genomics.

TNFPred: identifying tumor necrosis factors using hybrid features based on word embeddings

Yu-Yen Ou, Nguyen-Quoc-Khanh Le, Trinh-Trung-Duong Nguyen, 2020, BMC medical genomics.

DeepEfflux: a 2D convolutional neural network model for identifying families of efflux proteins in transporters

Yu-Yen Ou, Nguyen-Quoc-Khanh Le, Trinh-Trung-Duong Nguyen, 2018, Bioinform..

Using word embedding technique to efficiently represent protein sequences for identifying substrate specificities of transporters.

Yu-Yen Ou, Nguyen-Quoc-Khanh Le, Trinh-Trung-Duong Nguyen, 2019, Analytical biochemistry.

GT-Finder: Classify the family of glucose transporters with pre-trained BERT language models

Yu-Yen Ou, Trinh-Trung-Duong Nguyen, Quang-Thai Ho, 2021, Comput. Biol. Medicine.

A transformer architecture based on BERT and 2D convolutional neural network to identify DNA enhancers from sequence information

Yu-Yen Ou, Trinh-Trung-Duong Nguyen, Quang-Thai Ho, 2021, Briefings Bioinform..

Incorporating a transfer learning technique with amino acid embeddings to efficiently predict N-linked glycosylation sites in ion channels

Yu-Yen Ou, Trinh-Trung-Duong Nguyen, Nguyen-Quoc-Khanh Le, 2021, Comput. Biol. Medicine.

FAD-BERT: Improved prediction of FAD binding sites using pre-training of deep bidirectional transformers

Yu-Yen Ou, Trinh-Trung-Duong Nguyen, Quang-Thai Ho, 2021, Comput. Biol. Medicine.

Prediction of ATP-binding sites in membrane proteins using a two-dimensional convolutional neural network.

Yu-Yen Ou, Trinh-Trung-Duong Nguyen, Rosdyana Mangir Irawan Kusuma, 2019, Journal of molecular graphics & modelling.