Hiroki Shirai

发表

The SWIB and the MDM2 domains are homologous and share a common fold

Kenji Mizuguchi, Riccardo Bennett-Lovsey, Sarah E. Hart, 2002, Bioinform..

665 Demanded Structure of Washitsu from the View Point of the Scale of Washitsu? : Transfiguration of the Planning for The Modem House: Part8

鈴木義弘, 岡俊江, 切原舞子, 2012 .

Kotai Antibody Builder: automated high-resolution structural modeling of antibodies

Haruki Nakamura, Daron M. Standley, Shide Liang, 2014, Bioinform..

HOMSTRAD: adding sequence information to structure-based alignments of homologous protein families

Jiye Shi, Alex Bateman, Kenji Mizuguchi, 2001, Bioinform..

Identification of the Druggable Concavity in Homology Models Using the PLB Index

Hiroki Shirai, Noriaki Hirayama, Shinji Soga, 2007, J. Chem. Inf. Model..

Geomagnetic Surveys by the Geospatial Information Authority of Japan and the Contribution of the Kakioka Magnetic Observatory

Satoshi Abe, Hiroki Shirai, Isao Ueda, 2013, Data Sci. J..

Use of Amino Acid Composition to Predict Ligand-Binding Sites

Hiroki Shirai, Noriaki Hirayama, Shinji Soga, 2007, J. Chem. Inf. Model..

Chemocavity: Specific Concavity in Protein Reserved for the Binding of Biologically Functional Small Molecules

Hiroki Shirai, Noriaki Hirayama, Shinji Soga, 2008, J. Chem. Inf. Model..

High‐resolution modeling of antibody structures by a combination of bioinformatics, expert knowledge, and molecular simulations

Haruki Nakamura, Kenji Mizuguchi, Junichi Higo, 2014, Proteins.

Device Technology for embedded DRAM utilizing stacked MIM(Metal-Insulator-Metal) Capacitor

Takaho Tanigawa, Yasushi Yamagata, Ken Inoue, 2006, IEEE Custom Integrated Circuits Conference 2006.

[Interface between bioinformatics and docking study].

Hiroki Shirai, Masato Kobori, 2007, Yakugaku zasshi : Journal of the Pharmaceutical Society of Japan.

Affinity Improvement of a Therapeutic Antibody by Structure-Based Computational Design: Generation of Electrostatic Interactions in the Transition State Stabilizes the Antibody-Antigen Complex

Kouhei Tsumoto, Satoru Nagatoishi, Masato Kiyoshi, 2014, PloS one.

Molecular dynamics study on mobility and dipole ordering of solvent around proteins: effects of periodic-box size and protein charge

Haruki Nakamura, Junichi Higo, Hiroki Shirai, 1999 .

Use of amino acid composition to predict epitope residues of individual antibodies.

Hiroki Shirai, Noriaki Hirayama, Shinji Soga, 2010, Protein engineering, design & selection : PEDS.

Systematic classification of CDR‐L3 in antibodies: Implications of the light chain subtypes and the VL–VH interface

Haruki Nakamura, Hiroki Shirai, Masato Kobori, 2009, Proteins.

Two‐component multicanonical Monte Carlo method for effective conformation sampling

Haruki Nakamura, Akinori Kidera, Junichi Higo, 1997 .

Structural classification of CDR‐H3 revisited: A lesson in antibody modeling

Haruki Nakamura, Hiroki Shirai, Masato Kobori, 2008, Proteins.

A novel superfamily of enzymes that catalyze the modification of guanidino groups

Kenji Mizuguchi, Hiroki Shirai, Tom L. Blundell, 2001 .