Mark Stitt

发表

Independent components analysis of starch deficient pgm mutants

Joachim Selbig, Matthias Scholz, Yves Gibon, 2004, German Conference on Bioinformatics.

PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments

Yves Gibon, Mark Stitt, Henning Redestig, 2006, BMC Bioinformatics.

RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics

Mark Stitt, Björn Usadel, Alisdair R. Fernie, 2012, Nucleic Acids Res..

The research unit (Forschergruppe) Image Sequence Processing to Study Dynamical Processes

Bernd Jähne, Uli Schurr, Mark Stitt, 1997 .

Robin: An Intuitive Wizard Application for R-Based Expression Microarray Quality Assessment and Analysis1[W][OA]

Joachim Selbig, Dirk Walther, Mark Stitt, 2010, Plant Physiology.

Crops In Silico: Generating Virtual Crops Using an Integrative and Multi-scale Modeling Platform

Daniel S. Katz, Matthew J. Turk, John C. Hart, 2017, Front. Plant Sci..

Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data.

Mark Stitt, Takayuki Tohge, Björn Usadel, 2014, Plant, cell & environment.

Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes

Mark Stitt, Kazuki Saito, Henning Redestig, 2011, BMC Systems Biology.

GMD@CSB.DB: the Golm Metabolome Database

Yves Gibon, Mark Stitt, Lothar Willmitzer, 2005, Bioinform..

Visualizing large, high-throughput datasets based on the cognitive representation of biological pathways

Mark Stitt, Björn Usadel, Axel Nagel, 2011, Electronic Imaging.

Parallel analysis of Arabidopsis circadian clock mutants reveals different scales of transcriptome and proteome regulation

Mark Stitt, Wilhelm Gruissem, Diana Coman, 2017, Open Biology.

Target-based discovery of novel herbicides.

Mark Stitt, Frederik Börnke, Uwe Sonnewald, 2004, Current opinion in plant biology.

Flux an important, but neglected, component of functional genomics.

Mark Stitt, Alisdair R Fernie, M. Stitt, 2005, Current opinion in plant biology.

The role of active vision in exploring growth, transport, and exchange processes

Ulrich Schurr, Bernd Jähne, Mark Stitt, 1996 .

Circadian control of root elongation and C partitioning in Arabidopsis thaliana.

Mark Stitt, Nima Yazdanbakhsh, Joachim Fisahn, 2011, Plant, cell & environment.

Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: Extending MapMan ontology for grapevine

Mark Stitt, Björn Usadel, Kristina Gruden, 2009, BMC Plant Biology.

Sucrose synthase catalyses a readily reversible reaction in vivo in developing potato tubers and other plant tissues

Mark Stitt, M. Stitt, P. Geigenberger, 1993, Planta.

Multiscale digital Arabidopsis predicts individual organ and whole-organism growth (vol 111, pg E4127, 2014)

Robert Muetzelfeldt, Christopher L. Davey, Helen J. Ougham, 2015 .

The art of growing plants for experimental purposes: a practical guide for the plant biologist.

Fabio Fiorani, Yves Gibon, Mark Stitt, 2012, Functional plant biology : FPB.

Trehalose metabolism in plants.

Mark Stitt, M. Stitt, J. Lunn, 2014, The Plant journal : for cell and molecular biology.

Pyrimidine and purine biosynthesis and degradation in plants.

Mark Stitt, Uwe Sonnewald, M. Stitt, 2006, Annual review of plant biology.

Steps towards an integrated view of nitrogen metabolism.

Yves Gibon, Mark Stitt, Petronia Carillo, 2002, Journal of experimental botany.

From measurements of metabolites to metabolomics: an 'on the fly' perspective illustrated by recent studies of carbon-nitrogen interactions.

Mark Stitt, Alisdair R Fernie, M. Stitt, 2003, Current opinion in biotechnology.

Adjustment of carbon fluxes to light conditions regulates the daily turnover of starch in plants: a computational model.

Mark Stitt, Oliver Ebenhöh, Alexandra Pokhilko, 2014, Molecular bioSystems.

Subcellular compartmentation of pyrophosphate and alkaline pyrophosphatase in leaves

Mark Stitt, M. Stitt, H. Heldt, 1987 .

Variation of Enzyme Activities and Metabolite Levels in 24 Arabidopsis Accessions Growing in Carbon-Limited Conditions1[W]

Thomas Altmann, Yves Gibon, Mark Stitt, 2006, Plant Physiology.

Circadian, Carbon, and Light Control of Expansion Growth and Leaf Movement1[OPEN]

Mark Stitt, Zoran Nikoloski, Friedrich Kragler, 2017, Plant Physiology.

Genome-Wide Reprogramming of Primary and Secondary Metabolism, Protein Synthesis, Cellular Growth Processes, and the Regulatory Infrastructure of Arabidopsis in Response to Nitrogen1[w]

Mark Stitt, Michael K. Udvardi, Oliver Thimm, 2004, Plant Physiology.

Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae

Mark Stitt, Takayuki Tohge, Kazuki Saito, 2016, Nature Communications.

Starch synthesis in potato tubers is regulated by post-translational redox modification of ADP-glucose pyrophosphorylase: a novel regulatory mechanism linking starch synthesis to the sucrose supply.

Yves Gibon, Mark Stitt, Eva M Farré, 2002, The Plant cell.

Systems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit

Mark Stitt, Pierre Hilson, Peter Bühlmann, 2012, Molecular systems biology.

Global Transcript Levels Respond to Small Changes of the Carbon Status during Progressive Exhaustion of Carbohydrates in Arabidopsis Rosettes1[W][OA]

Yves Gibon, Mark Stitt, Björn Usadel, 2008, Plant Physiology.

Tobacco mutants with a decreased number of functional nia genes compensate by modifying the diurnal regulation of transcription, post-translational modification and turnover of nitrate reductase

Mark Stitt, Ernst-Detlef Schulze, Alain Gojon, 1997, Planta.

Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism[W]

Mark Stitt, Matteo Pellegrini, Timo Mühlhaus, 2014, Plant Cell.

Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida

Mark Stitt, Takayuki Tohge, Zoran Nikoloski, 2019, Nature Communications.

Systems-Level Analysis of Nitrogen Starvation–Induced Modifications of Carbon Metabolism in a Chlamydomonas reinhardtii Starchless Mutant[W]

Mark Stitt, Matteo Pellegrini, Nanette R Boyle, 2013, Plant Cell.

Engineering Strategies to Boost Crop Productivity by Cutting Respiratory Carbon Loss[OPEN]

Mark Stitt, Andrew D. Hanson, A. Harvey Millar, 2019, Plant Cell.

Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes

Yves Gibon, Mark Stitt, M. Stitt, 2006, Genome Biology.

The impact of decreased Rubisco on photosynthesis, growth, allocation and storage in tobacco plants which have been transformed with antisense rbcS

Ulrich Schurr, Mark Stitt, Steven R. Rodermel, 1991 .

Growth of tobacco in short-day conditions leads to high starch, low sugars, altered diurnal changes in the Nia transcript and low nitrate reductase activity, and inhibition of amino acid synthesis

Mark Stitt, M. Stitt, U. Schurr, 1998, Planta.

Recommendations for Reporting Metabolite Data[W]

Mark Stitt, Takayuki Tohge, Kazuki Saito, 2011, Plant Cell.

The effect of water stress on photosynthetic carbon metabolism in four species grown under field conditions

Mark Stitt, Maria Manuela Chaves, João Santos Pereira, 1992 .

Regulation of Flowering by Trehalose-6-Phosphate Signaling in Arabidopsis thaliana

Mark Stitt, Vanessa Wahl, M. Schmid, 2013, Science.

A plant for all seasons: alterations in photosynthetic carbon metabolism during cold acclimation in Arabidopsis.

Mark Stitt, M. Stitt, V. Hurry, 2002, Current opinion in plant biology.

Network Analysis of Enzyme Activities and Metabolite Levels and Their Relationship to Biomass in a Large Panel of Arabidopsis Accessions[C][W][OA]

Thomas Altmann, Yves Gibon, Mark Stitt, 2010, Plant Cell.

Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations.

Mark Stitt, Joost T. van Dongen, Ronan Sulpice, 2009, The Plant journal : for cell and molecular biology.

Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes.

Mark Stitt, M. Stitt, W. Scheible, 2004, The Plant journal : for cell and molecular biology.

Extension of the Visualization Tool MapMan to Allow Statistical Analysis of Arrays, Display of Coresponding Genes, and Comparison with Known Responses1

Joachim Selbig, Yves Gibon, Mark Stitt, 2005, Plant Physiology.

Metabolism and Growth in Arabidopsis Depend on the Daytime Temperature but Are Temperature-Compensated against Cool Nights[W][OA]

Mark Stitt, Ronan Sulpice, M. Stitt, 2012, Plant Cell.

The role of raffinose in the cold acclimation response of Arabidopsis thaliana

Mark Stitt, M. Stitt, D. Hincha, 2004, FEBS letters.

Sensitive and high throughput metabolite assays for inorganic pyrophosphate, ADPGlc, nucleotide phosphates, and glycolytic intermediates based on a novel enzymic cycling system.

Yves Gibon, Mark Stitt, Axel Tiessen, 2002, The Plant journal : for cell and molecular biology.

Metabolic and signaling aspects underpinning the regulation of plant carbon nitrogen interactions.

Mark Stitt, Alisdair R Fernie, Adriano Nunes-Nesi, 2010, Molecular plant.

A Robot-Based Platform to Measure Multiple Enzyme Activities in Arabidopsis Using a Set of Cycling Assays: Comparison of Changes of Enzyme Activities and Transcript Levels during Diurnal Cycles and in Prolonged Darknessw⃞

Joachim Selbig, Yves Gibon, Mark Stitt, 2004, The Plant Cell Online.

PHO 2 , MicroRNA 399 , and PHR 1 Define a Phosphate-Signaling Pathway in Plants 1 [ W ] [ OA ]

Mark Stitt, Rajendra Bari, M. Stitt, 2006 .

Substrate specificity and product inhibition of different forms of fructokinases and hexokinases in developing potato tubers

Mark Stitt, M. Stitt, A. Renz, 1993, Planta.

The interaction between elevated carbon dioxide and nitrogen nutrition: the physiological and molecular background

Mark Stitt, M. Stitt, A. Krapp, 1999 .

Metabolic control analysis and regulation of the conversion of sucrose to starch in growing potato tubers

Mark Stitt, Alisdair R. Fernie, M. Stitt, 2004 .

Single feature polymorphism (SFP)-based selective sweep identification and association mapping of growth-related metabolic traits in Arabidopsis thaliana

Thomas Altmann, Dirk Walther, Mark Stitt, 2010, BMC Genomics.

From Models to Crop Species: Caveats and Solutions for Translational Metabolomics

Mark Stitt, Takayuki Tohge, Alisdair R. Fernie, 2011, Front. Plant Sci..

Description and applications of a rapid and sensitive non-radioactive microplate-based assay for maximum and initial activity of D-ribulose-1,5-bisphosphate carboxylase/oxygenase.

Thomas Altmann, Yves Gibon, Mark Stitt, 2007, Plant, cell & environment.

Starch as a major integrator in the regulation of plant growth

Joachim Selbig, Thomas Altmann, Yves Gibon, 2009, Proceedings of the National Academy of Sciences.

Challenges in elevated CO2 experiments on forests.

Rainer Matyssek, Gail Taylor, Franco Miglietta, 2010, Trends in plant science.

Barley Grain Maturation and Germination: Metabolic Pathway and Regulatory Network Commonalities and Differences Highlighted by New MapMan/PageMan Profiling Tools1[W][OA]

Uwe Scholz, Marc Strickert, Mark Stitt, 2008, Plant Physiology.

Response of Arabidopsis primary metabolism and circadian clock to low night temperature in a natural light environment

Mark Stitt, Ursula Krause, Federico Apelt, 2018, Journal of experimental botany.

Malate Plays a Crucial Role in Starch Metabolism, Ripening, and Soluble Solid Content of Tomato Fruit and Affects Postharvest Softening[W][OA]

Mark Stitt, Fernando Carrari, Alisdair R Fernie, 2011, Plant Cell.

Accumulation of nitrate in the shoot acts as a signal to regulate shoot‐root allocation in tobacco†

Mark Stitt, Ernst-Detlef Schulze, E. Schulze, 1997 .

Comparative analyses of C4 and C3 photosynthesis in developing leaves of maize and rice

Mark Stitt, Takayuki Tohge, Alisdair R Fernie, 2014, Nature Biotechnology.

A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize.

Mark Stitt, Björn Usadel, Axel Nagel, 2009, Plant, cell & environment.

Circadian control of carbohydrate availability for growth in Arabidopsis plants at night

Mark Stitt, M. Stitt, Alison M. Smith, 2010, Proceedings of the National Academy of Sciences.

Image Sequence Analysis to Investigate Dynamic Processes, Progress Report II, DFG Research Unit FOR240, 3/1998-2/2001

Roland Eils, U. Schurr, Bernd Jähne, 2000 .

Sugars and Circadian Regulation Make Major Contributions to the Global Regulation of Diurnal Gene Expression in Arabidopsis[W][OA]

Yves Gibon, Mark Stitt, Oliver Thimm, 2005, The Plant Cell Online.

Metabolic Networks: How to Identify Key Components in the Regulation of Metabolism and Growth1

Mark Stitt, Ronan Sulpice, M. Stitt, 2009, Plant Physiology.