Himel Mallick, PhD, FASA

发表

Gut microbiome structure and metabolic activity in inflammatory bowel disease

Eric A. Franzosa, C. Huttenhower, E. Franzosa, 2018, Nature Microbiology.

Global chemical effects of the microbiome include new bile-acid conjugations

Julie C. Lumeng, Rob Knight, Mingxun Wang, 2020, Nature.

Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases

Colin J. Brislawn, R. White, C. Huttenhower, 2019, Nature.

Metatranscriptome of human fecal microbial communities in a cohort of adult men

E. Rimm, C. Huttenhower, A. Chan, 2018, Nature Microbiology.

Group regularization for zero-inflated poisson regression models with an application to insurance ratemaking

S. Chowdhury, Himel Mallick, Saptarshi Chatterjee, 2018, Journal of Applied Statistics.

Bayesian group bridge for bi-level variable selection

Nengjun Yi, Himel Mallick, N. Yi, 2017, Comput. Stat. Data Anal..

Oronasopharyngeal suction versus wiping of the mouth and nose at birth: a randomised equivalency trial

W. Carlo, N. Ambalavanan, A. Tripathi, 2013, The Lancet.

A Bayesian method for detecting pairwise associations in compositional data

Curtis Huttenhower, Himel Mallick, Steffen Ventz, 2017, PLoS Comput. Biol..

Multivariable association discovery in population-scale meta-omics studies

Timothy L. Tickle, Eric A. Franzosa, C. Huttenhower, 2021, bioRxiv.

EM Adaptive LASSO—A Multilocus Modeling Strategy for Detecting SNPs Associated with Zero-inflated Count Phenotypes

Hemant K. Tiwari, Himel Mallick, H. Tiwari, 2016, Front. Genet..

Stability of the human faecal microbiome in a cohort of adult men

E. Rimm, C. Huttenhower, A. Joshi, 2018, Nature Microbiology.

Population Structure Discovery in Meta-Analyzed Microbial Communities and Inflammatory Bowel Disease

C. Huttenhower, E. Franzosa, R. Kolde, 2020, bioRxiv.

Clinical trial designs incorporating predictive biomarkers.

D. Sargent, S. Mandrekar, Himel Mallick, 2016, Cancer treatment reviews.

Predictive metabolomic profiling of microbial communities using amplicon or metagenomic sequences

C. Huttenhower, E. Franzosa, A. Kostic, 2019, Nature Communications.

Experimental design and quantitative analysis of microbial community multiomics

C. Huttenhower, E. Franzosa, T. Vatanen, 2017, Genome Biology.

Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases

Kevin S. Bonham, Rob Knight, Antonio Gonzalez, 2019, Nature.

Author Correction: Gut microbiome structure and metabolic activity in inflammatory bowel disease

C. Huttenhower, E. Franzosa, T. Vatanen, 2019, Nature Microbiology.

Review History Huttenhower 1

C. Huttenhower, E. Franzosa, R. Kolde, 2022 .

Negative binomial mixed models for analyzing microbiome count data

Lei Zhang, Nengjun Yi, Xiangqin Cui, 2017, BMC Bioinformatics.

ZERO-INFLATED NEGATIVE BINOMIAL REGRESSION FOR DIFFERENTIAL ABUNDANCE TESTING IN MICROBIOME STUDIES

N. Yi, Xinyan Zhang, Himel Mallick, 2016 .

A genetic association study detects haplotypes associated with obstructive heart defects

T. Nick, M. Cleves, S. Macleod, 2014, Human Genetics.

Editorial: Statistical and Computational Methods for Microbiome Multi-Omics Data

V. Bucci, Lingling An, Himel Mallick, PhD, FASA, 2020, Frontiers in Genetics.

Stability of the human faecal microbiome in a cohort of adult men

David A. Drew, E. Rimm, C. Huttenhower, 2018, Nature Microbiology.

Transcriptomes and shRNA Suppressors in a TP53 Allele–Specific Model of Early-Onset Colon Cancer in African Americans

N. Yi, M. Birtwistle, P. Buckhaults, 2014, Molecular Cancer Research.

Genomics Transcriptomes and shRNA Suppressors in a TP 53 Allele – Speci fi c Model of Early-Onset Colon Cancer in African Americans

N. Yi, M. Birtwistle, P. Buckhaults, 2014 .

Association Between Sulfur-Metabolizing Bacterial Communities in Stool and Risk of Distal Colorectal Cancer in Men.

David A. Drew, E. Rimm, C. Huttenhower, 2020, Gastroenterology.

The reciprocal Bayesian LASSO

Vladimir Svetnik, Rahim Alhamzawi, Himel Mallick, 2020, Statistics in medicine.

Metatranscriptome of human fecal microbial communities in a cohort of adult men

David A. Drew, E. Rimm, C. Huttenhower, 2018, Nature Microbiology.

Multiple comparisons in genetic association studies: a hierarchical modeling approach

N. Yi, Shizhong Xu, X. Lou, 2014, Statistical applications in genetics and molecular biology.

Penalised regression methods in genetic research

Himel Mallick, M. Li, Himel Mallick, PhD, FASA, 2013 .

Clinical trial designs incorporating predictive biomarkers q

D. Sargent, S. Mandrekar, Himel Mallick, 2016 .

A Note on the Adaptive LASSO for Zero-Inflated Poisson Regression

S. Chowdhury, Himel Mallick, Saptarshi Chatterjee, 2018, Journal of Probability and Statistics.

Gut microbiome structure and metabolic activity in inflammatory bowel disease

C. Huttenhower, E. Franzosa, T. Vatanen, 2018, Nature Microbiology.

Predictive metabolomic profiling of microbial communities using amplicon or metagenomic sequences

C. Huttenhower, E. Franzosa, A. Kostic, 2019, Nature Communications.

Differences in Clinical Course, Genetics, and the Microbiome Between Familial and Sporadic Inflammatory Bowel Diseases

R. Xavier, A. Ananthakrishnan, Himel Mallick, 2018, Journal of Crohn's & colitis.

Population structure discovery in meta-analyzed microbial communities and inflammatory bowel disease using MMUPHin

C. Huttenhower, E. Franzosa, R. Kolde, 2022, Genome Biology.

EM Adaptive LASSO—A Multilocus Modeling Strategy for Detecting SNPs Associated with Zero-inflated Count Phenotypes

H. Tiwari, Himel Mallick, PhD, FASA, 2016, Front. Genet..

Bayesian bridge regression

N. Yi, Himel Mallick, Himel Mallick, PhD, FASA, 2018, Journal of applied statistics.

Bayesian reciprocal LASSO quantile regression

Himel Mallick, Rahim Alhamzawi, Himel Mallick, PhD, FASA, 2020, Commun. Stat. Simul. Comput..

Bayesian Methods for High Dimensional Linear Models.

Nengjun Yi, Himel Mallick, N. Yi, 2013, Journal of biometrics & biostatistics.

A New Bayesian Lasso.

Nengjun Yi, Himel Mallick, N. Yi, 2014, Statistics and its interface.

Hierarchical Models for Genetic Association Studies

Nengjun Yi, Himel Mallick, N. Yi, 2013 .

Group regularization for zero‐inflated negative binomial regression models with an application to health care demand in Germany

S. Chowdhury, Himel Mallick, Saptarshi Chatterjee, 2018, Statistics in medicine.