B. Tamboura

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Colonization factors among enterotoxigenic Escherichia coli isolates from children with moderate-to-severe diarrhea and from matched controls in the Global Enteric Multicenter Study (GEMS)

Q. Bassat, T. Farag, D. Rasko, 2019, PLoS neglected tropical diseases.

Colonization Density of the Upper Respiratory Tract as a Predictor of Pneumonia—Haemophilus influenzae, Moraxella catarrhalis, Staphylococcus aureus, and Pneumocystis jirovecii

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

The Etiology of Childhood Pneumonia in Mali

K. O'Brien, D. Murdoch, L. Hammitt, 2021, The Pediatric infectious disease journal.

Causes of severe pneumonia requiring hospital admission in children without HIV infection from Africa and Asia: the PERCH multi-country case-control study

S. Madhi, K. O'Brien, S. Zeger, 2019, The Lancet.

Association of C-Reactive Protein With Bacterial and Respiratory Syncytial Virus–Associated Pneumonia Among Children Aged <5 Years in the PERCH Study

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Is Higher Viral Load in the Upper Respiratory Tract Associated With Severe Pneumonia? Findings From the PERCH Study

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Density of Upper Respiratory Colonization With Streptococcus pneumoniae and Its Role in the Diagnosis of Pneumococcal Pneumonia Among Children Aged <5 Years in the PERCH Study

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Standardization of Laboratory Methods for the PERCH Study

S. Madhi, K. O'Brien, R. Karron, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

The Effect of Antibiotic Exposure and Specimen Volume on the Detection of Bacterial Pathogens in Children With Pneumonia

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Limited Utility of Polymerase Chain Reaction in Induced Sputum Specimens for Determining the Causes of Childhood Pneumonia in Resource-Poor Settings: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Standardization of Clinical Assessment and Sample Collection Across All PERCH Study Sites

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Evaluation of Pneumococcal Load in Blood by Polymerase Chain Reaction for the Diagnosis of Pneumococcal Pneumonia in Young Children in the PERCH Study

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Chest Radiograph Findings in Childhood Pneumonia Cases From the Multisite PERCH Study

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

The Diagnostic Utility of Induced Sputum Microscopy and Culture in Childhood Pneumonia

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Microscopic Analysis and Quality Assessment of Induced Sputum From Children With Pneumonia in the PERCH Study

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Impact of the addition of azithromycin to antimalarials used for seasonal malaria chemoprevention on antimicrobial resistance of Streptococcus pneumoniae

A. Dicko, H. Tinto, B. Greenwood, 2019, Tropical medicine & international health : TM & IH.

Detection of Pneumococcal DNA in Blood by Polymerase Chain Reaction for Diagnosing Pneumococcal Pneumonia in Young Children From Low- and Middle-Income Countries

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Chest Radiograph Findings in Childhood Pneumonia Cases From the Multi‐Site Perch Study

S. Madhi, K. O'Brien, S. Zeger, 2018 .

Characteristics of Salmonella Recovered From Stools of Children Enrolled in the Global Enteric Multicenter Study

N. Hall, Q. Bassat, T. Farag, 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study

Inacio Mandomando, Anowar Hossain, Martin Antonio, 2013, The Lancet.

Quantitative PCR for Detection of Shigella Improves Ascertainment of Shigella Burden in Children with Moderate-to-Severe Diarrhea in Low-Income Countries

M. Pop, D. Rasko, M. Levine, 2013, Journal of Clinical Microbiology.

Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition

Mihai Pop, Julian Parkhill, Hector Corrada Bravo, 2014, Genome Biology.

Microbiota That Affect Risk for Shigellosis in Children in Low-Income Countries

M. Pop, L. Magder, T. Farag, 2015, Emerging infectious diseases.

Survey of Culture, GoldenGate Assay, Universal Biosensor Assay, and 16S rRNA Gene Sequencing as Alternative Methods of Bacterial Pathogen Detection

M. Pop, D. Ecker, R. Sampath, 2013, Journal of Clinical Microbiology.

Diagnostic Microbiologic Methods in the GEMS-1 Case/Control Study

R. Glass, W. Petri, M. Levine, 2012, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Potential coverage of a multivalent M protein-based group A streptococcal vaccine.

J. Nataro, M. Tapia, S. Sow, 2013, Vaccine.

Safety of Induced Sputum Collection in Children Hospitalized With Severe or Very Severe Pneumonia

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Should Controls With Respiratory Symptoms Be Excluded From Case-Control Studies of Pneumonia Etiology? Reflections From the PERCH Study

S. Madhi, K. O'Brien, S. Zeger, 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Maternal immunisation with trivalent inactivated influenza vaccine for prevention of influenza in infants in Mali: a prospective, active-controlled, observer-blind, randomised phase 4 trial

Evan W. Orenstein, M. Levine, W. Blackwelder, 2016, The Lancet. Infectious diseases.

The incidence, aetiology, and adverse clinical consequences of less severe diarrhoeal episodes among infants and children residing in low-income and middle-income countries: a 12-month case-control study as a follow-on to the Global Enteric Multicenter Study (GEMS)

Tamer Farag, Inacio Mandomando, Anowar Hossain, 2019, The Lancet. Global health.

Streptococcal Pharyngitis in Schoolchildren in Bamako, Mali

W. Blackwelder, J. Nataro, M. Tapia, 2015, The Pediatric infectious disease journal.

Evolution of atypical enteropathogenic E. coli by repeated acquisition of LEE pathogenicity island variants

David J. Edwards, G. Dougan, K. Holt, 2016, Nature Microbiology.

Use of quantitative molecular diagnostic methods to identify causes of diarrhoea in children: a reanalysis of the GEMS case-control study

Fatima Aziz, Inacio Mandomando, Anowar Hossain, 2016, The Lancet.

Epidemiology, Risk Factors, and Outcomes of Respiratory Syncytial Virus Infections in Newborns in Bamako, Mali

M. Levine, M. Tapia, S. Sow, 2019, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

EilA, a HilA‐like regulator in enteroaggregative Escherichia coli

J. Nataro, E. Dudley, Jalaluddin Sheikh, 2006, Molecular microbiology.

Efficacy, duration of protection, birth outcomes, and infant growth associated with influenza vaccination in pregnancy: a pooled analysis of three randomised controlled trials

Stephanie A. Jones, S. Madhi, J. Katz, 2020, The Lancet. Respiratory medicine.

Moderate-to-Severe Diarrhea and Stunting Among Children Younger Than 5 Years: Findings From the Vaccine Impact on Diarrhea in Africa (VIDA) Study

M. Antonio, D. Nasrin, J. Verani, 2023, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Quality of Piped and Stored Water in Households with Children Under Five Years of Age Enrolled in the Mali Site of the Global Enteric Multi-Center Study (GEMS)

T. Farag, M. Levine, W. Blackwelder, 2013, The American journal of tropical medicine and hygiene.

Diarrhoeal disease and subsequent risk of death in infants and children residing in low-income and middle-income countries: analysis of the GEMS case-control study and 12-month GEMS-1A follow-on study

Q. Bassat, T. Farag, M. Levine, 2019, The Lancet. Global health.

Direct Detection of Shigella in Stool Specimens by Use of a Metagenomic Approach

M. Levine, P. Alonso, T. Ramamurthy, 2017, Journal of Clinical Microbiology.

Detection of Shigella in direct stool specimens using a metagenomic approach

M. Levine, P. Alonso, T. Ramamurthy, 2017 .

Aeromonas-Associated Diarrhea in Children Under 5 Years: The GEMS Experience.

Q. Bassat, T. Farag, M. Levine, 2016, The American journal of tropical medicine and hygiene.

Delayed 2009 pandemic influenza A virus subtype H1N1 circulation in West Africa, May 2009-April 2010.

M. Widdowson, S. Lindstrom, B. Oyofo, 2012, The Journal of infectious diseases.

Household transmission of Neisseria meningitidis in the African meningitis belt: a longitudinal cohort study.

J. Gomis, N. Basta, D. Chandramohan, 2016, The Lancet. Global health.

The Diversity of Meningococcal Carriage Across the African Meningitis Belt and the Impact of Vaccination With a Group A Meningococcal Conjugate Vaccine

J. Gomis, N. Basta, D. Chandramohan, 2015, The Journal of infectious diseases.

Shigella Isolates From the Global Enteric Multicenter Study Inform Vaccine Development

T. Farag, M. Levine, W. Blackwelder, 2014, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Meningococcal carriage within households in the African meningitis belt: A longitudinal pilot study

M. Halloran, N. Basta, B. Greenwood, 2017, The Journal of infection.

Pathogens Associated With Linear Growth Faltering in Children With Diarrhea and Impact of Antibiotic Treatment: The Global Enteric Multicenter Study

Q. Bassat, T. Farag, M. Levine, 2021, The Journal of infectious diseases.

Genomic Characterization of Enteroaggregative Escherichia coli From Children in Mali

D. Rasko, M. Levine, Julia C. Redman, 2011, The Journal of infectious diseases.

Randomized, Placebo-Controlled, Double-Blind Phase 2 Trial Comparing the Reactogenicity and Immunogenicity of a Single Standard Dose to Those of a High Dose of CVD 103-HgR Live Attenuated Oral Cholera Vaccine, with Shanchol Inactivated Oral Vaccine as an Open-Label Immunologic Comparator

M. Levine, W. Blackwelder, Wilbur H. Chen, 2017, Clinical and Vaccine Immunology.

PCR Method To Identify Salmonella enterica Serovars Typhi, Paratyphi A, and Paratyphi B among Salmonella Isolates from the Blood of Patients with Clinical Enteric Fever

Rosanna Lagos, M. Levine, P. Fields, 2008, Journal of Clinical Microbiology.

The Burden of Cryptosporidium Diarrheal Disease among Children < 24 Months of Age in Moderate/High Mortality Regions of Sub-Saharan Africa and South Asia, Utilizing Data from the Global Enteric Multicenter Study (GEMS)

Inacio Mandomando, Anowar Hossain, Martin Antonio, 2016, PLoS neglected tropical diseases.

Identification by PCR of Non-typhoidal Salmonella enterica Serovars Associated with Invasive Infections among Febrile Patients in Mali

M. Levine, P. Fields, J. Nataro, 2010, PLoS neglected tropical diseases.

Characterization of Invasive Salmonella Serogroup C1 Infections in Mali

M. Tapia, S. Sow, U. Onwuchekwa, 2017, The American journal of tropical medicine and hygiene.

Invasive Nontyphoidal Salmonella Infections Among Children in Mali, 2002-2014: Microbiological and Epidemiologic Features Guide Vaccine Development.

M. Levine, M. Tapia, S. Sow, 2015, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

The Clinical Presentation of Culture-positive and Culture-negative, Quantitative Polymerase Chain Reaction (qPCR)-Attributable Shigellosis in the Global Enteric Multicenter Study and Derivation of a Shigella Severity Score: Implications for Pediatric Shigella Vaccine Trials

R. Haque, M. Levine, N. Iqbal, 2020, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Genomic diversity of EPEC associated with clinical presentations of differing severity

D. Rasko, M. Levine, T. Ramamurthy, 2016, Nature Microbiology.

Bacterial Factors Associated with Lethal Outcome of Enteropathogenic Escherichia coli Infection: Genomic Case-Control Studies

T. Farag, D. Rasko, M. Levine, 2015, PLoS neglected tropical diseases.

Histo-Blood Group Antigen Null Phenotypes Associated With a Decreased Risk of Clinical Rotavirus Vaccine Failure Among Children <2 Years of Age Participating in the Vaccine Impact on Diarrhea in Africa (VIDA) Study in Kenya, Mali, and the Gambia

J. Tate, U. Parashar, K. Neuzil, 2023, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Pharyngeal carriage of Neisseria species in the African meningitis belt

B. Greenwood, A. Aseffa, M. Maiden, 2016, The Journal of infection.

Migrations and nutritional status in the sahel.

P. Autier, V. Vercruysse, B. Tamboura, 1989, Disasters.

Risk factors for acquisition of meningococcal carriage in the African meningitis belt

J. Gomis, N. Basta, D. Chandramohan, 2019, Tropical medicine & international health : TM & IH.

Quantitative PCR for Detection of Shigella Improves Ascertainment of Shigella Burden in Children with Moderate-to-Severe Diarrhea in Low-Income Countries

D. Rasko, M. Levine, B. Lindsay, 2013, Journal of Clinical Microbiology.

Survey of Culture, GoldenGate Assay, Universal Biosensor Assay, and 16S rRNA Gene Sequencing as Alternative Methods of Bacterial Pathogen Detection

D. Ecker, R. Sampath, L. Magder, 2013, Journal of Clinical Microbiology.