Stefania Bortoluzzi

发表

Detection of chromosomal regions showing differential gene expression in human skeletal muscle and in alveolar rhabdomyosarcoma

Andrea Bisognin, Stefania Bortoluzzi, Gian Antonio Danieli, 2004, BMC Bioinform..

A multistep bioinformatic approach detects putative regulatory elements in gene promoters

Cinzia Pizzi, Andrea Bisognin, Stefania Bortoluzzi, 2005, BMC Bioinformatics.

A survey of software tools for microRNA discovery and characterization using RNA-seq

Stefania Bortoluzzi, Michele Bortolomeazzi, Enrico Gaffo, 2019, Briefings Bioinform..

MAGIA2: from miRNA and genes expression data integrative analysis to microRNA–transcription factor mixed regulatory circuits (2012 update)

Gabriele Sales, Chiara Romualdi, Andrea Bisognin, 2012, Nucleic Acids Res..

A-MADMAN: Annotation-based microarray data meta-analysis tool

Chiara Romualdi, Davide Risso, Silvio Bicciato, 2009, BMC Bioinformatics.

MAGIA, a web-based tool for miRNA and Genes Integrated Analysis

Gabriele Sales, Chiara Romualdi, Andrea Bisognin, 2010, Nucleic Acids Res..

iWhale: a computational pipeline based on Docker and SCons for detection and annotation of somatic variants in cancer WES data

Stefania Bortoluzzi, Andrea Binatti, Silvia Bresolin, 2020, Briefings Bioinform..

Novel definition files for human GeneChips based on GeneAnnot

Doron Lancet, Marilyn Safran, Silvio Bicciato, 2007, BMC Bioinformatics.

REEF: searching REgionally Enriched Features in genomes

Stefania Bortoluzzi, Gian Antonio Danieli, Alessandro Coppe, 2006, BMC Bioinformatics.

Critical Analysis of Transcriptional and Post-Transcriptional Regulatory Networks in Multiple Myeloma

Massimo Marchiori, Lino Possamai, Silvio Bicciato, 2010, Pacific Symposium on Biocomputing.

Differential expression of genes coding for ribosomal proteins in different human tissues

Chiara Romualdi, Stefania Bortoluzzi, Gian Antonio Danieli, 2001, Bioinform..

Identification of microRNA expression patterns and definition of a microRNA/mRNA regulatory network in distinct molecular groups of multiple myeloma.

Gabriele Sales, Stefania Bortoluzzi, Silvio Bicciato, 2009, Blood.

Impact of microRNAs on regulatory networks and pathways in human colorectal carcinogenesis and development of metastasis

Stefania Bortoluzzi, Simone Mocellin, Marta Biasiolo, 2013, BMC Genomics.

TRAM (Transcriptome Mapper): database-driven creation and analysis of transcriptome maps from multiple sources

Luca Lenzi, Raffaella Casadei, Silvia Canaider, 2011, BMC Genomics.

Sequencing, de novo annotation and analysis of the first Anguilla anguilla transcriptome: EeelBase opens new perspectives for the study of the critically endangered european eel

Stefania Bortoluzzi, Gregory E Maes, Alessandro Coppe, 2010, BMC Genomics.

IDEG6: a web tool for detection of differentially expressed genes in multiple tag sampling experiments.

Chiara Romualdi, Stefania Bortoluzzi, Gian Antonio Danieli, 2003, Physiological genomics.

An integrative approach for the identification of prognostic and predictive biomarkers in rectal cancer

Igor Jurisica, Chiara Pastrello, Flavio Rizzolio, 2015, Oncotarget.

Detecting seeded motifs in DNA sequences

Cinzia Pizzi, Stefania Bortoluzzi, Gian Antonio Danieli, 2005, Nucleic acids research.

Novel genes, possibly relevant for molecular diagnosis or therapy of human rhabdomyosarcoma, detected by genomic expression profiling.

Chiara Romualdi, Stefania Bortoluzzi, Gian Antonio Danieli, 2005, Gene.

Surviving in a toxic world: transcriptomics and gene expression profiling in response to environmental pollution in the critically endangered European eel

Adrian Covaci, Stefania Bortoluzzi, Tomaso Patarnello, 2012, BMC Genomics.