K. Waggle

Predictive model for severe COVID-19 using SARS-CoV-2 whole-genome sequencing and electronic health record data, March 2020-May 2021

G. Snyder, L. Harrison, O. Marroquin, 2022, PloS one.

Genomic Diversity of Hospital-Acquired Infections Revealed through Prospective Whole-Genome Sequencing-Based Surveillance

Jane W. Marsh, V. Cooper, L. Harrison, 2021, bioRxiv.

Whole Genome Sequencing Surveillance and Machine Learning of the Electronic Health Record for Enhanced Healthcare Outbreak Detection.

K. Shutt, D. Van Tyne, Jieshi Chen, 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Outbreak of Pseudomonas aeruginosa Infections from a Contaminated Gastroscope Detected by Whole Genome Sequencing Surveillance.

Jane W. Marsh, G. Snyder, A. Dubrawski, 2020, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Genomic characterization of SARS-CoV-2 from vaccine breakthrough cases in Allegheny County, Pennsylvania

Jane W. Marsh, G. Snyder, V. Cooper, 2022, PloS one.

Real-time genomic epidemiologic investigation of a multispecies plasmid-associated hospital outbreak of NDM-5-producing Enterobacterales infections

D. Van Tyne, Ashley M. Ayres, Nathan J. Raabe, 2024, International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases.

Genomic Epidemiologic Investigation of a Multispecies Hospital Outbreak of NDM-5-Producing Enterobacterales Infections

G. Snyder, D. V. Tyne, E. Mills, 2023, medRxiv.