Dorothea K. Thompson

发表

High‐Throughput Technologies and Functional Genomics

Xiu-Feng Wan, Dorothea K. Thompson, 2009 .

Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory

Feng Luo, Latifur Khan, Yunfeng Yang, 2007, BMC Bioinformatics.

Trace: Tennessee Research and Creative Exchange Microbiology Publications and Other Works Microbiology So2426 Is a Positive Regulator of Siderophore Expression in Shewanella Oneidensis Mr-1 Recommended Citation So2426 Is a Positive Regulator of Siderophore Expression in Shewanella Oneidensis Mr-1

Dorothea K. Thompson, K. L. Henne, X. Wan, 2022 .

Arguing for Experimental “Facts” in Science

Dorothea K. Thompson, 1993 .

Microarray Technology and Applications in Environmental Microbiology

Dorothea K. Thompson, Jizhong Zhou, Jizhong Zhou, 2004 .

Development and Evaluation of Functional Gene Arrays for Detection of Selected Genes in the Environment

Dorothea K. Thompson, Jizhong Zhou, J. Tiedje, 2001, Applied and Environmental Microbiology.

Development and evaluation of microarray-based whole-genome hybridization for detection of microorganisms within the context of environmental applications.

Dorothea K. Thompson, Jizhong Zhou, J. Tiedje, 2004, Environmental science & technology.

Transcriptomic and Proteomic Characterization of the Fur Modulon in the Metal-Reducing Bacterium Shewanella oneidensis

Dorothea K. Thompson, Jizhong Zhou, Liyou Wu, 2004, Journal of bacteriology.

Transcriptional and Proteomic Analysis of a Ferric Uptake Regulator (Fur) Mutant of Shewanella oneidensis: Possible Involvement of Fur in Energy Metabolism, Transcriptional Regulation, and Oxidative Stress

Carol S. Giometti, James M. Tiedje, Craig C. Brandt, 2002, Applied and Environmental Microbiology.

DNA Microarray Technology

Dorothea K. Thompson, Jizhong Zhou, Jizhong Zhou, 2005 .

Global Transcriptome Analysis of the Heat Shock Response of Shewanella oneidensis

Dorothea K. Thompson, Adam Arkin, Liyou Wu, 2004, Journal of bacteriology.

Molecular Dynamics of the Shewanella oneidensis Response to Chromate Stress*S

Manesh Shah, Dorothea K. Thompson, Jizhong Zhou, 2006, Molecular & Cellular Proteomics.

Microbial Functional Genomics: Zhou/Microbial Functional Genomics

Dorothea K. Thompson, Jizhong Zhou, Jizhong Zhou, 2005 .

Metagenome Analysis of Contaminated Sediments at the DOE Hanford Site

Lee Ann McCue, Eugene Kolker, Yunfeng Yang, 2005 .

Microarray Transcription Profiling of a Shewanella oneidensis etrA Mutant

Kenneth H. Nealson, Dorothea K. Thompson, Liyou Wu, 2002, Journal of bacteriology.

Intracellularly grown gold nanoislands as SERS substrates for monitoring chromate, sulfate and nitrate localization sites in remediating bacteria biofilms by Raman chemical imaging.

Dorothea K. Thompson, J. Irudayaraj, U. Kadam, 2012, Analytica chimica acta.

Global Transcriptome Analysis of the Heat Shock Response of Shewanella oneidensis Running Title: Genomic Analysis of S. oneidensis Heat Shock Response

Dorothea K. Thompson, Jizhong Zhou, Liyou Wu, 2004 .

A computational study of Shewanella oneidensis MR-1: structural prediction and functional inference of hypothetical proteins.

Dorothea K. Thompson, Jizhong Zhou, Dong Xu, 2003, Omics : a journal of integrative biology.

High-level chromate resistance in Arthrobacter sp. strain FB24 requires previously uncharacterized accessory genes

Dorothea K. Thompson, A. Konopka, C. Nakatsu, 2009, BMC Microbiology.

Dosage-dependent proteome response of Shewanella oneidensis MR-1 to acute chromate challenge.

Dorothea K. Thompson, R. Hettich, M. Shah, 2007, Journal of proteome research.

Global Transcriptome Analysis of the Cold Shock Response of Shewanella oneidensis MR-1 and Mutational Analysis of Its Classical Cold Shock Proteins‡

Dorothea K. Thompson, Jizhong Zhou, Liyou Wu, 2006 .

Global Molecular and Morphological Effects of 24-Hour Chromium(VI) Exposure on Shewanella oneidensis MR-1

Dorothea K. Thompson, Jizhong Zhou, J. Morrell-Falvey, 2006, Applied and Environmental Microbiology.

A putative azoreductase gene is involved in the Shewanella oneidensis response to heavy metal stress

Dorothea K. Thompson, G. S. Wickham, Brittany A. Law, 2009, Applied Microbiology and Biotechnology.

Microarrays: Applications in Environmental Microbiology

Dorothea K. Thompson, Jizhong Zhou, 2003 .

Cellular Response of Shewanella oneidensis to Strontium Stress

Katherine H. Huang, Dorothea K. Thompson, A. Arkin, 2006, Applied and Environmental Microbiology.

Transcriptome Analysis of Shewanella oneidensis MR-1 in Response to Elevated Salt Conditions

Dorothea K. Thompson, A. Arkin, Jizhong Zhou, 2005, Journal of bacteriology.

Expression and heat‐responsive regulation of a TFIIB homologue from the archaeon Haloferax volcanii

Dorothea K. Thompson, C. Daniels, J. Palmer, 1999, Molecular microbiology.

Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation

Eugene V Koonin, Dorothea K. Thompson, Kira S Makarova, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Microarray-based whole-genome hybridization as a tool for determining procaryotic species relatedness

Dorothea K. Thompson, Jizhong Zhou, J. Tiedje, 2008, The ISME Journal.

Global proteomic analysis of the chromate response in Arthrobacter sp. strain FB24.

Dorothea K. Thompson, A. Konopka, C. Nakatsu, 2009, Journal of proteome research.

Comparative temporal proteomics of a response regulator (SO2426)-deficient strain and wild-type Shewanella oneidensis MR-1 during chromate transformation.

Manesh Shah, Dorothea K. Thompson, R. Hettich, 2009, Journal of proteome research.

Global Transcriptome Analysis of the Cold Shock Response of Shewanellaoneidensis MR-1 and Mutational Analysis of Its ClassicalCold ShockProteins

Dorothea K. Thompson, Jizhong Zhou, Liyou Wu, 2006, Journal of bacteriology.

Transcriptome analysis reveals response regulator SO2426-mediated gene expression in Shewanella oneidensis MR-1 under chromate challenge

Dorothea K. Thompson, X. Wan, Wei Wei, 2008, BMC Genomics.

Heat shock inducibility of an archaeal TATA‐like promoter is controlled by adjacent sequence elements

Dorothea K. Thompson, C. Daniels, Dorothea K. Thompson, 1998, Molecular microbiology.

Challenges in applying microarrays to environmental studies.

Dorothea K. Thompson, Jizhong Zhou, 2002, Current opinion in biotechnology.

Transcriptome Profiling of Shewanella oneidensis Gene Expression following Exposure to Acidic and Alkaline pH

Katherine H. Huang, Dorothea K. Thompson, A. Arkin, 2006, Journal of bacteriology.

Proteomics reveals a core molecular response of Pseudomonas putida F1 to acute chromate challenge

Dorothea K. Thompson, R. Hettich, Bing Zhang, 2010, BMC Genomics.

Raman chemical imaging of chromate reduction sites in a single bacterium using intracellularly grown gold nanoislands.

Dorothea K. Thompson, J. Irudayaraj, K. L. Henne, 2011, ACS nano.

Gene and protein expression profiles of Shewanella oneidensis during anaerobic growth with different electron acceptors.

Guangshan Li, Hanjo Lim, James M Tiedje, 2002, Omics : a journal of integrative biology.

Microarray Transcription Profiling of a Shewanella oneidensis

Dorothea K. Thompson, Jizhong Zhou, K. Nealson, 2002 .

Surface-Enhanced Raman Imaging of Intracellular Bioreduction of Chromate in Shewanella oneidensis

Dorothea K. Thompson, J. Irudayaraj, K. L. Henne, 2011, PloS one.

Systematic assessment of the benefits and caveats in mining microbial post-translational modifications from shotgun proteomic data: the response of Shewanella oneidensis to chromate exposure.

Dorothea K. Thompson, R. Hettich, M. R. Thompson, 2008, Journal of proteome research.