Ludovica Montanucci

发表

Conserved patterns across ion channels correlate with variant pathogenicity and clinical phenotypes

P. May, M. Nothnagel, S. Schorge, 2022, bioRxiv.

Genetic adaptation of the antibacterial human innate immunity network

M. Netea, P. Awadalla, J. Bertranpetit, 2011, BMC Evolutionary Biology.

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Jaume Bertranpetit, Hafid Laayouni, Ludovica Montanucci, 2011 .

DDGun: an untrained predictor of protein stability changes upon amino acid variants

E. Capriotti, P. Fariselli, L. Montanucci, 2022, Nucleic Acids Res..

Influence of pathway topology and functional class on the molecular evolution of human metabolic genes

Kevin L. Keys, J. Bertranpetit, J. Peretó, 2018, bioRxiv.

Multivariate and machine learning approaches for honey botanical origin authentication using near infrared spectroscopy

L. Montanucci, F. Fontana, S. Balzan, 2019, Journal of Near Infrared Spectroscopy.

Data imputation and machine learning improve association analysis and genomic prediction for resistance to fish photobacteriosis in the gilthead sea bream

L. Bargelloni, S. Ferraresso, M. Babbucci, 2021, Aquaculture Reports.

Limitations and challenges in protein stability prediction upon genome variations: towards future applications in precision medicine

Giovanni Birolo, Piero Fariselli, Emidio Capriotti, 2020, Computational and structural biotechnology journal.

Dynamic sensitivity and nonlinear interactions influence the system-level evolutionary patterns of phototransduction proteins

J. Bertranpetit, L. Montanucci, B. Invergo, 2015, Proceedings of the Royal Society B: Biological Sciences.

A system-level, molecular evolutionary analysis of mammalian phototransduction

J. Bertranpetit, H. Laayouni, L. Montanucci, 2013, BMC Evolutionary Biology.

A comprehensive model of the phototransduction cascade in mouse rod cells.

J. Bertranpetit, K. Koch, D. Dell’Orco, 2014, Molecular bioSystems.

DDGun: an untrained method for the prediction of protein stability changes upon single and multiple point variations

Piero Fariselli, Emidio Capriotti, Nir Ben-Tal, 2019, BMC Bioinformatics.

An In Vivo Whole-Transcriptomic Approach to Assess Developmental and Reproductive Impairments Caused by Flumequine in Daphnia magna

M. Pauletto, M. Giantin, M. Dacasto, 2023, International journal of molecular sciences.

Multivariate and machine learning models to assess the heat effects on honey physicochemical, colour and NIR data

L. Montanucci, S. Balzan, R. Merlanti, 2019, European Food Research and Technology.

Molecular evolution and network-level analysis of the N-glycosylation metabolic pathway across primates.

Giovanni Marco Dall'Olio, Jaume Bertranpetit, Hafid Laayouni, 2011, Molecular biology and evolution.

The annotation of the asparagine N-linked glycosylation pathway in the Reactome database.

Giovanni Marco Dall'Olio, Jaume Bertranpetit, Hafid Laayouni, 2011, Glycobiology.

Exploring the rate-limiting steps in visual phototransduction recovery by bottom-up kinetic modeling

J. Bertranpetit, K. Koch, D. Dell’Orco, 2013, Cell Communication and Signaling.

On the biases in predictions of protein stability changes upon variations: the INPS test case

Piero Fariselli, Castrense Savojardo, Pier Luigi Martelli, 2018, Bioinform..

P. Awadalla, D. Comas, Marta Melé, 2011, PloS one.

Fido-SNP: the first webserver for scoring the impact of single nucleotide variants in the dog genome

E. Capriotti, P. Fariselli, Giuseppe Profiti, 2019, Nucleic Acids Res..

Genome-wide identification and phenotypic characterization of seizure-associated copy number variations in 741,075 individuals

Ryan L. Collins, M. Talkowski, I. Helbig, 2023, Nature communications.

The LIBI Grid Platform for Bioinformatics

Ernesto Picardi, Piero Fariselli, Italo Epicoco, 2008 .

Distribution of events of positive selection and population differentiation in a metabolic pathway: the case of asparagine N-glycosylation

P. Luisi, J. Bertranpetit, M. Sikora, 2012, BMC Evolutionary Biology.

The Network Framework of Molecular Evolution

Jaume Bertranpetit, Ludovica Montanucci, Hafi Laayouni, 2014 .

CNV-ClinViewer: enhancing the clinical interpretation of large copy-number variants online

Ryan L. Collins, Daniel J. Blankenberg, P. May, 2022, medRxiv.

Pathogenic paralogous variants can be used to apply the ACMG PS1 and PM5 variant interpretation criteria

P. May, M. Nothnagel, I. Helbig, 2023, medRxiv.

Pyrrolizidine alkaloid concentrations in local Italian and retail honeys of different origin: A scenario of human exposure

L. Montanucci, R. Merlanti, L. Lucatello, 2021, Journal of Food Composition and Analysis.

A comprehensive model of the phototransduction cascade in mouse rod cells.

J. Bertranpetit, K. Koch, D. Dell’Orco, 2014, Molecular bioSystems.

Gene connectivity and enzyme evolution in the human metabolic network

J. Bertranpetit, J. Peretó, H. Laayouni, 2019, Biology Direct.

SLC6A1 variant pathogenicity, molecular function and phenotype: a genetic and clinical analysis

P. May, P. Striano, A. Wuster, 2023, Brain : a journal of neurology.

Molecular dynamics simulations reveal molecular mechanisms for the gain and loss of function effects of four SCN2A variants

William R. Martin, A. Brunklaus, Tobias Brünger, 2024, bioRxiv.

Generation and characterization of cytochrome P450 3A74 CRISPR/Cas9 knockout bovine foetal hepatocyte cell line (BFH12).

N. Laham-Karam, F. Bonsembiante, M. Pauletto, 2024, Biochemical pharmacology.

A Whole-Transcriptomic Analysis of Canine Oral Melanoma: A Chance to Disclose the Radiotherapy Effect and Outcome-Associated Gene Signature

P. Laganga, V. Leone, M. Pauletto, 2024, Genes.

Predicting protein thermostability changes from sequence upon multiple mutations

Piero Fariselli, Pier Luigi Martelli, Rita Casadio, 2008, ISMB.