Tonje G. Lien

发表

Investigating Coordinated Architectures Across Clusters in Integrative Studies: a Bayesian Two-Way Latent Structure Model

Arnoldo Frigessi, David M. Swanson, Tonje G. Lien, 2018 .

Hi-C-constrained physical models of human chromosomes recover functionally-related properties of genome organization

Eivind Hovig, Cristian Micheletti, Tonje G. Lien, 2016 .

Hi-C-constrained physical models of human chromosomes recover functionally-related properties of genome organization

Eivind Hovig, Tonje G. Lien, Jonas Paulsen, 2016, Scientific Reports.

Handling realistic assumptions in hypothesis testing of 3D co-localization of genomic elements

Geir Kjetil Sandve, Eivind Hovig, Ingrid K. Glad, 2013, Nucleic acids research.

Prognostic value of PAM50 and risk of recurrence score in patients with early-stage breast cancer with long-term follow-up

Vessela N. Kristensen, Tonje G. Lien, Therese Sørlie, 2017, Breast Cancer Research.

Comparative analysis of the molecular subtype landscape in canine and human mammary gland tumors

Tonje G. Lien, T. Sørlie, F. Lingaas, 2022, Journal of Mammary Gland Biology and Neoplasia.

Statistical methods for epigenomic data: Studying the importance of 3D chromatin structure and DNA-methylation.

Tonje G. Lien, T. Lien, 2015 .

Integrated analysis of DNA-methylation and gene expression using high-dimensional penalized regression: a cohort study on bone mineral density in postmenopausal women

Tonje G. Lien, I. Glad, S. Reppe, 2018, BMC Medical Genomics.

Distinct DNA methylation profiles in bone and blood of osteoporotic and healthy postmenopausal women

Tonje G. Lien, I. Glad, S. Reppe, 2017, Epigenetics.

A Bayesian Two-Way Latent Structure Model for Genomic Data Integration Reveals Few Pan-Genomic Cluster Subtypes in a Breast Cancer Cohort

Arnoldo Frigessi, David Swanson, Tonje G. Lien, 2018, bioRxiv.

An independent poor-prognosis subtype of breast cancer defined by a distinct tumor immune microenvironment

Tonje G. Lien, A. Frigessi, T. Sørlie, 2019, Nature Communications.

Contrasting DCIS and invasive breast cancer by subtype suggests basal-like DCIS as distinct lesions

Tonje G. Lien, Olaf Johan Hartmann-Johnsen, A. Frigessi, 2020, npj Breast Cancer.

HiBrowse: multi-purpose statistical analysis of genome-wide chromatin 3D organization

Geir Kjetil Sandve, Eivind Hovig, Sveinung Gundersen, 2014, Bioinform..

Multi-Omics Marker Analysis Enables Early Prediction of Breast Tumor Progression

Tonje G. Lien, T. Sørlie, T. Aittokallio, 2021, Frontiers in Genetics.

Tailored graphical lasso for data integration in gene network reconstruction

Tonje G. Lien, Ørnulf Borgan, Ingrid K Glad, 2020, BMC Bioinformatics.

Contrasting DCIS and invasive breast cancer by subtype suggests basal-like DCIS as distinct lesions

Tonje G. Lien, Olaf Johan Hartmann-Johnsen, A. Frigessi, 2020, npj Breast Cancer.

The Genomic HyperBrowser: an analysis web server for genome-scale data

Finn Drabløs, Geir Kjetil Sandve, Vegard Nygaard, 2013, Nucleic Acids Res..

A national precision cancer medicine implementation initiative for Norway

Tonje G. Lien, P. Lønning, R. Lothe, 2022, Nature Medicine.

A pan-cancer atlas of transcriptional dependence on DNA methylation and copy number aberrations

Tonje G. Lien, T. Sørlie, O. Lingjærde, 2020, bioRxiv.

Immune phenotype of tumor microenvironment predicts response to bevacizumab in neoadjuvant treatment of ER‐positive breast cancer

Tonje G. Lien, O. Lingjaerde, A. Børresen-Dale, 2020, International journal of cancer.

Better prediction by use of co‐data: adaptive group‐regularized ridge regression

Wessel N van Wieringen, Mark A van de Wiel, Tonje G Lien, 2014, Statistics in medicine.

A Longitudinal Study of the Association between Mammographic Density and Gene Expression in Normal Breast Tissue

Tonje G. Lien, T. Sørlie, G. Ursin, 2019, Journal of Mammary Gland Biology and Neoplasia.

RNA sequencing-based single sample predictors of molecular subtype and risk of recurrence for clinical assessment of early-stage breast cancer

Tonje G. Lien, L. Saal, T. Sørlie, 2021, npj Breast Cancer.

Prognostic value of PAM50 and risk of recurrence score in patients with early-stage breast cancer with long-term follow-up

Tonje G. Lien, T. Sørlie, V. Kristensen, 2017, Breast Cancer Research.

Sample Preparation Approach Influences PAM50 Risk of Recurrence Score in Early Breast Cancer

Tonje G. Lien, T. Sørlie, Å. Borg, 2021, Cancers.

Integrated analysis of DNA-methylation and gene expression using high-dimensional penalized regression: a cohort study on bone mineral density in postmenopausal women

Tonje G. Lien, I. Glad, S. Reppe, 2018, BMC medical genomics.

Integrated analysis of DNA-methylation and gene expression using high-dimensional penalized regression: a cohort study on bone mineral density in postmenopausal women

Tonje G. Lien, I. Glad, S. Reppe, 2018, BMC Medical Genomics.

A Bayesian two-way latent structure model for genomic data integration reveals few pan-genomic cluster subtypes in a breast cancer cohort

Arnoldo Frigessi, Tonje G. Lien, Helga Bergholtz, 2019, Bioinform..

Distinct DNA methylation profiles in bone and blood of osteoporotic and healthy postmenopausal women

Tonje G. Lien, I. Glad, S. Reppe, 2017, Epigenetics.

Better prediction by use of co‐data: adaptive group‐regularized ridge regression

Tonje G. Lien, W. N. Wieringen, Mark A. Wiel, 2014, Statistics in medicine.

Investigating Coordinated Architectures Across Clusters in Integrative Studies: a Bayesian Two-Way Latent Structure Model

Tonje G. Lien, A. Frigessi, T. Sørlie, 2018 .

The Genomic HyperBrowser: an analysis web server for genome-scale data

Tonje G. Lien, G. K. Sandve, A. Frigessi, 2013, Nucleic Acids Res..