Emily E. Burke

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SPEAQeasy: a Scalable Pipeline for Expression Analysis and Quantification for R/Bioconductor-powered RNA-seq analyses

Joshua Stolz, Andrew E. Jaffe, Nick Eagles, 2020 .

Target specific routing of visual information by the superior colliculus

Chen Li, Karl Farrow, Katja Reinhard, 2018, bioRxiv.

SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/bioconductor-powered RNA-seq analyses

Leonardo Collado-Torres, Andrew E. Jaffe, Louise A. Huuki, 2020, BMC Bioinformatics.

SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/bioconductor-powered RNA-seq analyses

Leonardo Collado-Torres, Andrew E. Jaffe, Emily E. Burke, 2021, BMC Bioinform..

Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs

Emily E. Burke, BaDoi N. Phan, R. Straub, 2020, Nature Communications.

Profiling gene expression in the human dentate gyrus granule cell layer reveals insights into schizophrenia and its genetic risk

Emily E. Burke, J. Kleinman, D. Weinberger, 2020, Nature Neuroscience.

Regional Heterogeneity in Gene Expression, Regulation, and Coherence in the Frontal Cortex and Hippocampus across Development and Schizophrenia

Emily E. Burke, A. Jaffe, L. Collado-Torres, 2019, Neuron.

Comprehensive assessment of multiple biases in small RNA sequencing reveals significant differences in the performance of widely used methods

Emily E. Burke, D. Weinberger, N. Brandon, 2018, BMC Genomics.

Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs

Emily E. Burke, BaDoi N. Phan, R. Straub, 2018, bioRxiv.

Analysis of the caudate nucleus transcriptome in individuals with schizophrenia highlights effects of antipsychotics and new risk genes

Emily E. Burke, Jennifer A. Erwin, J. Kleinman, 2022, Nature Neuroscience.

U.S. Catholic bishops’ silence and denialism on climate change

Emily E. Burke, S. Danielsen, D. Dileo, 2021, Environmental Research Letters.

Neuronal and glial 3D chromatin architecture informs the cellular etiology of brain disorders

Michael J. Purcaro, Emily E. Burke, Annie W Shieh, 2021, Nature Communications.

Divergent neuronal DNA methylation patterns across human cortical development: Critical periods and a unique role of CpH methylation

Emily E. Burke, J. Kleinman, D. Weinberger, 2018, bioRxiv.

Emily E. Burke, BaDoi N. Phan, J. Simon, 2020, Nature Neuroscience.

Amygdala and anterior cingulate transcriptomes from individuals with bipolar disorder reveal down-regulated neuroimmune and synaptic pathways

Emily E. Burke, P. Zandi, J. Kleinman, 2022, Nature Neuroscience.

Characterizing the nuclear and cytoplasmic transcriptomes in developing and mature human cortex uncovers new insight into psychiatric disease gene regulation

Emily E. Burke, J. Kleinman, D. Weinberger, 2019, bioRxiv.

Revealing the brain's molecular architecture.

Michael J. Purcaro, Emily E. Burke, Annie W Shieh, 2018, Science.

Developmental Profile of Psychiatric Risk Associated With Voltage-Gated Cation Channel Activity

Emily E. Burke, M. Owen, M. O’Donovan, 2020, Biological Psychiatry.

Caudate transcriptome implicates decreased presynaptic autoregulation as the dopamine risk factor for schizophrenia

Emily E. Burke, Jennifer A. Erwin, J. Kleinman, 2020, medRxiv.

Emily E. Burke, BaDoi N. Phan, J. Sweatt, 2019, Nature Neuroscience.

Comprehensive assessment of multiple biases in small RNA sequencing reveals significant differences in the performance of widely used methods

Alan J. Cross, Leonardo Collado-Torres, Andrew E. Jaffe, 2018, bioRxiv.

Profiling gene expression in the human dentate gyrus granule cell layer reveals insights into schizophrenia and its genetic risk

Emily E. Burke, J. Kleinman, D. Weinberger, 2020, Nature Neuroscience.

Defects of myelination are common pathophysiology in syndromic and idiopathic autism spectrum disorders

Emily E. Burke, BaDoi N. Phan, J. Simon, 2017, bioRxiv.

Divergent neuronal DNA methylation patterns across human cortical development reveal critical periods and a unique role of CpH methylation

Emily E. Burke, J. Kleinman, D. Weinberger, 2019, Genome Biology.

Regional Heterogeneity in Gene Expression, Regulation, and Coherence in the Frontal Cortex and Hippocampus across Development and Schizophrenia

Emily E. Burke, A. Jaffe, L. Collado-Torres, 2019, Neuron.

Developmental Pro ﬁ le of Psychiatric Risk Associated With Voltage-Gated Cation Channel Activity

Emily E. Burke, P. Holmans, A. Jaffe, 2023 .

Neuronal and glial 3D chromatin architecture informs the cellular Neuronal and glial 3D chromatin architecture informs the cellular etiology of brain disorders etiology of brain disorders Let us know how access to this document benefits you.

Michael J. Purcaro, Luis de la Torre Ubieta, Emily E. Burke, 2021 .