Peng Liu

发表

Response to Persistent ER Stress in Plants: A Multiphasic Process That Transitions Cells from Prosurvival Activities to Cell Death[OPEN]

Carolyn J. Lawrence-Dill, Carolyn J. Lawrence-Dill, A. Stapleton, 2018, Plant Cell.

Genetic dissection of seasonal vegetation index dynamics in maize through aerial based high‐throughput phenotyping

K. Price, Xianran Li, Jianming Yu, 2021, The plant genome.

Characterization of maize leaf pyruvate orthophosphate dikinase using high throughput sequencing.

A. Fernie, T. Brutnell, Pinghua Li, 2018, Journal of integrative plant biology.

Developmental dynamics of Kranz cell transcriptional specificity in maize leaf reveals early onset of C4-related processes

Yaqing Si, T. Brutnell, Pinghua Li, 2014, Journal of experimental botany.

The developmental dynamics of the maize leaf transcriptome

Robert Turgeon, Peng Liu, Pinghua Li, 2010, Nature Genetics.

Multi-omics Approaches to Deciphering a Hypervirulent Strain of Campylobacter jejuni

O. Sahin, Zuowei Wu, Qijing Zhang, 2013, Genome biology and evolution.

Comparative analyses of C4 and C3 photosynthesis in developing leaves of maize and rice

Mark Stitt, Takayuki Tohge, Alisdair R Fernie, 2014, Nature Biotechnology.

Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons

Jeffrey C. Berry, Kira M. Veley, Omri M. Finkel, 2021, The ISME Journal.

Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection

J. Dekkers, S. Carpenter, J. Lunney, 2015, BMC Genomics.

Avian pathogenic Escherichia coli (APEC) infection alters bone marrow transcriptome in chickens

P. Liu, S. Lamont, Hongyan Sun, 2015, BMC Genomics.

A multi-treatment experimental system to examine photosynthetic differentiation in the maize leaf

T. Brutnell, P. Liu, Ruairidh J. H. Sawers, 2007, BMC Genomics.

Combined analysis of primary lymphoid tissues' transcriptomic response to extra-intestinal Escherichia coli (ExPEC) infection.

P. Liu, S. Lamont, Hongyan Sun, 2016, Developmental and comparative immunology.

Transcriptome Analysis of Avian Pathogenic Escherichia coli O1 in Chicken Serum Reveals Adaptive Responses to Systemic Infection

C. Constantinidou, Peng Liu, T. Johnson, 2011, Infection and Immunity.

Molecular signatures of retinal ganglion cells revealed through single cell profiling

Lauren A. Laboissonniere, G. Schwartz, J. Trimarchi, 2019, Scientific Reports.

Cluster Analysis of RNA-Sequencing Data

Peng Liu, Yaqing Si, P. Liu, 2014 .

Single cell transcriptome profiling of developing chick retinal cells

Lauren A. Laboissonniere, J. Trimarchi, P. Liu, 2017, The Journal of comparative neurology.

Effects of Dietary Resistant Starch on the Wnt Signaling Pathway and Preneoplastic Cells in the Colons of Azoxymethane-Treated Rats

L. Pollak, S. Duvick, P. Liu, 2017, Nutrition and cancer.

Transcriptomic Analysis of Leaf Sheath Maturation in Maize

T. Brutnell, Pinghua Li, P. Liu, 2019, International journal of molecular sciences.

Deregulation of Maize C4 Photosynthetic Development in a Mesophyll Cell-Defective Mutant1[C][W][OA]

Peng Liu, Wojciech Majeran, W. Majeran, 2008, Plant Physiology.

Genome Analysis Deregulation of Maize C 4 Photosynthetic Development in a Mesophyll Cell-Defective Mutant 1 [ C ] [ W ] [ OA ]

W. Majeran, T. Brutnell, Peng Liu, 2008 .

Adaptive mechanisms of Campylobacter jejuni to erythromycin treatment

O. Sahin, Zuowei Wu, Qijing Zhang, 2013, BMC Microbiology.

A comparison of statistical methods for detecting differentially expressed genes from RNA-seq data.

Vanessa M Kvam, P. Liu, Yaqing Si, 2012, American journal of botany.

Leukocyte transcriptome from chickens infected with avian pathogenic Escherichia coli identifies pathways associated with resistance.

M. Orr, S. Lamont, Huaijun Zhou, 2012, Results in immunology.

Transcriptome-Wide Changes in Chlamydomonas reinhardtii Gene Expression Regulated by Carbon Dioxide and the CO2-Concentrating Mechanism Regulator CIA5/CCM1[W][OA]

M. Pellegrini, I. Ladunga, Yaqing Si, 2012, Plant Cell.

Metabolomics of sorghum roots during nitrogen stress reveals compromised metabolic capacity for salicylic acid biosynthesis

Amy M. Sheflin, S. Tringe, S. Kresovich, 2019, Plant direct.

Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization

Amy M. Sheflin, S. Tringe, D. Schachtman, 2020, BMC Bioinformatics.

Transcriptome response of cassava leaves under natural shade

T. Brutnell, Pinghua Li, Qi Sun, 2016, Scientific Reports.

An Optimal Test with Maximum Average Power While Controlling FDR with Application to RNA‐Seq Data

Peng Liu, Yaqing Si, Yaqing Si, 2013, Biometrics.

Control of translation during the unfolded protein response in maize seedlings: Life without PERKs

W. Miller, S. Howell, R. Srivastava, 2020, Plant direct.

A Semi-parametric Bayesian Approach for Differential Expression Analysis of RNA-seq Data

P. Liu, Chong Wang, F. Liu, 2015, Journal of Agricultural, Biological, and Environmental Statistics.

Effect of Dietary-Resistant Starch on Inhibition of Colonic Preneoplasia and Wnt Signaling in Azoxymethane-Induced Rodent Models

P. Liu, Y. Ai, D. Birt, 2016, Nutrition and cancer.

self-organizing map Clustering gene expression data using adaptive double

Peng Liu, Dali Wang, Habtom W. Ressom, 2015 .

Spleen transcriptome response to infection with avian pathogenic Escherichia coli in broiler chickens

M. Orr, P. Liu, S. Lamont, 2011, BMC Genomics.

Compare Expression Profiles for Pre-defined Gene Groups with C-REx

Peng Liu, Kokulapalan Wimalanathan, Mingze He, 2019, J. Open Source Softw..

A hypothesis-driven approach to assessing significance of differences in RNA expression levels among specific groups of genes

Carolyn J. Lawrence-Dill, Carolyn J. Lawrence-Dill, P. Liu, 2017, bioRxiv.

A comparison of statistical methods for detecting differentially expressed genes from RNA-seq data.

Vanessa M Kvam, Yaqing Si, Peng Liu, 2012, American journal of botany.

Metabolomics of sorghum roots during nitrogen stress reveals compromised metabolic capacity for salicylic acid biosynthesis

Amy M. Sheflin, S. Tringe, S. Kresovich, 2019, Plant direct.