Francisco J. Pardo-Palacios

发表

1 SQANTI : extensive characterization of long read transcript sequences for quality control in 1 full-length transcriptome identification and quantification 2 3

Lennart Martens, Ana Conesa, Manuel Tardaguila, 2017 .

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

Jonathan M. Mudge, Angela N. Brooks, Gloria M. Sheynkman, 2021 .

The evolution of splicing: transcriptome complexity and transcript distances implemented in TranD

A. Conesa, L. McIntyre, Rebekah L. Rogers, 2021, bioRxiv.

Flap-enabled next-generation capture (FENGC): precision targeted single-molecule profiling of epigenetic heterogeneity, chromatin dynamics, and genetic variation

Jeremy R. B. Newman, Marie-Pierre L. Gauthier, A. Conesa, 2022, bioRxiv.

SQANTI-SIM: a simulator of controlled transcript novelty for lrRNA-seq benchmark

A. Conesa, Tianyuan Liu, Francisco J. Pardo-Palacios, 2023, bioRxiv.

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

Jonathan M. Mudge, Angela N. Brooks, Gloria M. Sheynkman, 2023, bioRxiv.

SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms

A. Conesa, E. Tseng, L. McIntyre, 2023, bioRxiv.

Systematic assessment of long-read RNA-seq methods for transcript identi cation and quanti cation

Jonathan M. Mudge, Angela N. Brooks, Gloria M. Sheynkman, 2021 .

SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification

Lennart Martens, Ana Conesa, Manuel Tardaguila, 2017, bioRxiv.

Corrigendum: SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.

M. Tress, I. Ezkurdia, A. Mortazavi, 2018, Genome research.