Joel S. Rozowsky

发表

VAT: a computational framework to functionally annotate variants in personal genomes within a cloud-computing environment

Mark Gerstein, David Z. Chen, Michael Snyder, 2012, Bioinform..

Bioinformatics Original Paper a Supervised Hidden Markov Model Framework for Efficiently Segmenting Tiling Array Data in Transcriptional and Chip-chip Experiments: Systematically Incorporating Validated Biological Knowledge

Mark Gerstein, Jan O. Korbel, Michael Snyder, 2022 .

Modeling ChIP Sequencing In Silico with Applications

Mark Gerstein, Michael Snyder, Joel S. Rozowsky, 2008, PLoS Comput. Biol..

Tiling array data analysis: a multiscale approach using wavelets

Mark Gerstein, Joel S. Rozowsky, Alexander Karpikov, 2011, BMC Bioinformatics.

Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites

Mark Gerstein, Michael Snyder, Paul Bertone, 2005, BSB.

Comparative analysis of regulatory information and circuits across distant species

Peter J. Bickel, Mark Gerstein, Philip Cayting, 2014, Nature.

ACT: aggregation and correlation toolbox for analyses of genome tracks

Lucas Lochovsky, Mark Gerstein, Jie Wang, 2011, Bioinform..

Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies

Kei-Hoi Cheung, Andrew I. Su, Bob S. Carter, 2015, Journal of extracellular vesicles.

Bioinformatics Applications Note Gene Expression Rseqtools: a Modular Framework to Analyze Rna-seq Data Using Compact, Anonymized Data Summaries

Mark Gerstein, Ashish Agarwal, Michael Snyder, 2022 .

Construction and Analysis of an Integrated Regulatory Network Derived from High-Throughput Sequencing Data

Wei Niu, Mark Gerstein, Jiang Qian, 2011, PLoS Comput. Biol..

Loregic: A Method to Characterize the Cooperative Logic of Regulatory Factors

Mark Gerstein, Chao Cheng, Daifeng Wang, 2015, PLoS Comput. Biol..

Assessing the need for sequence-based normalization in tiling microarray experiments

Mark Gerstein, Thomas E. Royce, Joel S. Rozowsky, 2007, Bioinform..