Wei-Qi Wei

发表

Evaluating electronic health record data sources and algorithmic approaches to identify hypertensive individuals

Joshua C Denny, Pedro L Teixeira, Wei-Qi Wei, 2017, J. Am. Medical Informatics Assoc..

Combining Publicly-Available and Electronic Health Record Data to Reposition Drugs

Joshua C. Denny, Wei-Qi Wei, Patrick Wu, 2019, AMIA.

Detecting time-evolving phenotypic topics via tensor factorization on electronic health records: Cardiovascular disease case study

Yun Zhang, S. Trent Rosenbloom, Joshua C. Denny, 2019, J. Biomed. Informatics.

The absence of longitudinal data limits the accuracy of high-throughput clinical phenotyping for identifying type 2 diabetes mellitus subjects

Christopher G. Chute, Abel N. Kho, Wei-Qi Wei, 2013, Int. J. Medical Informatics.

Using PheWAS and Natural Language Processing to Discover Clinical Associations for Congenital Chest Deformities

Joshua C. Denny, Lisa Bastarache, Wei-Qi Wei, 2013, AMIA.

Analyzing Differences between Chinese and English Clinical Text: A Cross-Institution Comparison of Discharge Summaries in Two Languages

Kai Zheng, Hua Xu, Randolph A. Miller, 2016, MedInfo.

Assessing the role of a medication-indication resource in the treatment relation extraction from clinical text

Cosmin Adrian Bejan, Joshua C. Denny, Wei-Qi Wei, 2015, J. Am. Medical Informatics Assoc..

Harmonizing Clinical Sequencing and Interpretation for the eMERGE III Network.

Robert C. Green, Keith Marsolo, Casey Overby Taylor, 2019, American journal of human genetics.

Quantifying Tobacco Exposure Using Clinical Notes and Natural Language Processing to Enable Lung Cancer Screening

Joshua C. Denny, Wei-Qi Wei, Travis Osterman, 2015, AMIA.

Characterizing Design Patterns of EHR-Driven Phenotype Extraction Algorithms

George Hripcsak, Christopher G. Chute, Yuan Luo, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Developing and Evaluating Mappings of ICD-10 and ICD-10-CM Codes to Phecodes

Joshua C. Denny, Xue Li, Wei-Qi Wei, 2018, bioRxiv.

Using Topic Modeling to Identify Relationship between LPA Variant and Disease Phenotypes

Joshua C. Denny, Wei-Qi Wei, Juan Zhao, 2018, AMIA.

Learning from Longitudinal Data in Electronic Health Record and Genetic Data to Improve Cardiovascular Event Prediction

Joshua C Denny, Wei-Qi Wei, Juan Zhao, 2018, Scientific Reports.

Classifying ICD-9 codes into meaningful disease categories: A comparison between two coding systems

Joshua C. Denny, Lisa Bastarache, Wei-Qi Wei, 2013, AMIA.

Learning from Longitudinal Data in Electronic Health Record and Genetic Data to Improve Cardiovascular Event Prediction

Joshua C. Denny, Wei-Qi Wei, Juan Zhao, 2018 .

PheMap: a multi-resource knowledge base for high-throughput phenotyping within electronic health records

Wei-Qi Wei, Juan Zhao, C Michael Stein, 2020, J. Am. Medical Informatics Assoc..

Combining billing codes, clinical notes, and medications from electronic health records provides superior phenotyping performance

Joshua C. Denny, Jeremy L. Warner, Wei-Qi Wei, 2016, J. Am. Medical Informatics Assoc..

Validation and Enhancement of a Computable Medication Indication Resource (MEDI) Using a Large Practice-based Dataset

Joshua C. Denny, Lisa Bastarache, Wei-Qi Wei, 2013, AMIA.

PheWAS Network Analysis and Visualization

Joshua C. Denny, Shyr Yu, Eric Torstenson, 2015, AMIA.

Comparing Diagnoses Recorded in Problem Lists vs. Administrative Codes

Joshua C. Denny, Lisa Bastarache, Wei-Qi Wei, 2012, AMIA.

Deep Learning Using Electronic Health Records and Genetic Data to Predict Cardiovascular Diseases

Joshua C. Denny, Wei-Qi Wei, Patrick Wu, 2019, AMIA.

Use of diverse electronic medical record systems to identify genetic risk for type 2 diabetes within a genome-wide association study

Suzette J. Bielinski, Christopher G. Chute, Joshua C. Denny, 2012, J. Am. Medical Informatics Assoc..

Association of BMI and Obesity Genetic Risk Score with Surgical Procedures Through a Procedure-wide Association Study

Joshua C. Denny, Lisa Bastarache, Wei-Qi Wei, 2017, AMIA.

Time-Oriented Question Answering from Clinical Narratives Using Semantic-Web Techniques

Cui Tao, Christopher G. Chute, Guergana K. Savova, 2010, SEMWEB.

Terminology representation guidelines for biomedical ontologies in the semantic web notations

Cui Tao, Christopher G. Chute, Jyotishman Pathak, 2013, J. Biomed. Informatics.

Evaluation of Diagnosis Codes, Clinical Notes, and Medications on Identifying Subjects with a Specific Disease Phenotype

Joshua C. Denny, Jeremy L. Warner, Wei-Qi Wei, 2014, AMIA.

A Phenome-Wide Association Study (PheWAS) of Iron Deficiency in a Large Electronic Health Record Database

Joshua C. Denny, Wei-Qi Wei, Patrick Wu, 2017, AMIA.

Detecting potential pleiotropy across cardiovascular and neurological diseases using univariate, bivariate, and multivariate methods on 43,870 individuals from the eMERGE network

Xinyuan Zhang, Marylyn D. Ritchie, Chunhua Weng, 2018, PSB.

Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network

Joshua C. Denny, Chunhua Weng, Wei-Qi Wei, 2019, J. Biomed. Informatics.

Development and evaluation of an ensemble resource linking medications to their indications

Hua Xu, Joshua C. Denny, Lisa Bastarache, 2013, J. Am. Medical Informatics Assoc..

Impact of data fragmentation across healthcare centers on the accuracy of a high-throughput clinical phenotyping algorithm for specifying subjects with type 2 diabetes mellitus

Pedro J. Caraballo, Christopher G. Chute, Abel N. Kho, 2012, J. Am. Medical Informatics Assoc..

Diabetes and Susceptibility to Infection: A Study of Lab Culture Results in the EMR

Joshua C. Denny, Lisa Bastarache, Wei-Qi Wei, 2012, AMIA.

DDIWAS: High-throughput electronic health record-based screening of drug-drug interactions

Joshua C Denny, Wei-Qi Wei, Dan M Roden, 2021, J. Am. Medical Informatics Assoc..

Natural language processing to identify lupus nephritis phenotype in electronic health records pdf

Chunhua Weng, Yuan Luo, Chengsheng Mao, 2021, ArXiv.

Phenotype risk scores identify patients with unrecognized Mendelian disease patterns

Joshua C. Denny, Lisa Bastarache, Wei-Qi Wei, 2018, Science.

Creation and Validation of an EMR-based Algorithm for Identifying Major Adverse Cardiac Events while on Statins

Joshua C. Denny, Wei-Qi Wei, Russell A. Wilke, 2014, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

LPA Variants Are Associated With Residual Cardiovascular Risk in Patients Receiving Statins

George Hripcsak, Joshua C. Denny, Peggy L. Peissig, 2018, Circulation.

Using topic modeling via non-negative matrix factorization to identify relationships between genetic variants and disease phenotypes: A case study of Lipoprotein(a) (LPA)

Joshua C Denny, Wei-Qi Wei, Juan Zhao, 2018, bioRxiv.

Pharmacogenetic meta-analysis of genome-wide association studies of LDL cholesterol response to statins

Matti Pirinen, David M. Herrington, Alex Doney, 2014, Nature Communications.

Development of an ensemble resource linking MEDications to their Indications (MEDI).

Lisa Bastarache, Joshua C Denny, Wei-Qi Wei, 2013, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

MR-PheWAS: exploring the causal effect of SUA level on multiple disease outcomes by using genetic instruments in UK Biobank

Joshua C Denny, Wei-Qi Wei, Xiangrui Meng, 2018, Annals of the rheumatic diseases.

Trans-ethnic association study of blood pressure determinants in over 750,000 individuals

Laura J. Scott, Yu Wang, Joshua C. Denny, 2018, Nature Genetics.

Mapping ICD-10 and ICD-10-CM Codes to Phecodes: Workflow Development and Initial Evaluation

Lisa Bastarache, Joshua C Denny, Wei-Qi Wei, 2019, JMIR Medical Informatics.

Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies

Lars G Fritsche, Joshua C Denny, Wei-Qi Wei, 2017, Nature Genetics.

Meta-analysis of genome-wide association studies of HDL cholesterol response to statins

Joshua C Denny, Wei-Qi Wei, Fredrik Nyberg, 2016, Journal of Medical Genetics.