Ruijie Zhang

发表

Integrative analysis of genome-wide association studies and gene expression analysis identifies pathways associated with rheumatoid arthritis

Yongshuai Jiang, Hongbo Mu, Hongchao Lv, 2016, Oncotarget.

Measles Contributes to Rheumatoid Arthritis: Evidence from Pathway and Network Analyses of Genome-Wide Association Studies

Zugen Chen, Yongshuai Jiang, Y. Miao, 2013, PloS one.

eSNPO: An eQTL-based SNP Ontology and SNP functional enrichment analysis platform

Tao Jiang, Chunyu Wang, Hongchao Lv, 2016, Scientific Reports.

Calculation of Similarity Between 26 Autoimmune Diseases Based on Three Measurements Including Network, Function, and Semantics

Fengmin Zhang, Chao Wang, Ruijie Zhang, 2021, Frontiers in Genetics.

The shared and specific mechanism of four autoimmune diseases

Hongchao Lv, Zhenwei Shang, Mingming Zhang, 2017, Oncotarget.

Association between the IL7R T244I polymorphism and multiple sclerosis: a meta-analysis

Yongshuai Jiang, Xuehong Zhang, P. Sun, 2011, Molecular Biology Reports.

Identification of hub lncRNA ceRNAs in multiple sclerosis based on ceRNA mechanisms

Fengmin Zhang, Chao Wang, Xinwei Yan, 2021, Molecular Genetics and Genomics.

Genome-wide pathway-based association analysis identifies risk pathways associated with Parkinson’s disease

Yongshuai Jiang, Hongbo Mu, Hongchao Lv, 2017, Neuroscience.

Identification of key genes associated with multiple sclerosis based on gene expression data from peripheral blood mononuclear cells

Ruijie Zhang, Songbin Fu, Zhenwei Shang, 2020, PeerJ.

Functional combination strategy for prioritization of human miRNA target.

Ruijie Zhang, Xinrui Shi, Chunquan Li, 2014, Gene.

Revealing epigenetic patterns in gene regulation through integrative analysis of epigenetic interaction network

Xueting Wu, Hongbo Liu, Jianzhong Su, 2012, Molecular Biology Reports.

The drug target genes show higher evolutionary conservation than non-target genes

Yongshuai Jiang, Ruijie Zhang, Hongchao Lv, 2015, Oncotarget.

Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for Acute Myeloid Leukemia

Hongchao Lv, Jin Li, Zhenwei Shang, 2016, Oncotarget.

A gene-based information gain method for detecting gene–gene interactions in case–control studies

Chunyu Wang, Hongchao Lv, Ruijie Zhang, 2015, European Journal of Human Genetics.

RADB: a database of rheumatoid arthritis-related polymorphisms

He Chen, Miao Shi, Jin Li, 2014, Database J. Biol. Databases Curation.

Prioritization of rheumatoid arthritis risk subpathways based on global immune subpathway interaction network and random walk strategy.

Wenhua Lv, Ruijie Zhang, Yongshuai Jiang, 2015, Molecular bioSystems.

DBGSA: a novel method of distance-based gene set analysis

Jiankai Xu, Maozu Guo, Yongshuai Jiang, 2012, Journal of Human Genetics.

Prioritization of candidate genes for periodontitis using multiple computational tools.

Wenhua Lv, Hongchao Lv, Zhenwei Shang, 2014, Journal of periodontology.

HGPGD: The Human Gene Population Genetic Difference Database

Yongshuai Jiang, Ruijie Zhang, Hongchao Lv, 2013, PloS one.

Comparing the evolutionary conservation between human essential genes, human orthologs of mouse essential genes and human housekeeping genes

Miao Shi, Lian Duan, Mingming Zhang, 2015, Briefings Bioinform..

Genes with stable DNA methylation levels show higher evolutionary conservation than genes with fluctuant DNA methylation levels

Yongshuai Jiang, Ruijie Zhang, Hongchao Lv, 2015, Oncotarget.

Genome-Wide Pathway Analysis of Microarray Data Identifies Risk Pathways Related to Salt Stress in Arabidopsis Thaliana

Hongbo Mu, Shenkui Liu, Mingming Zhang, 2018, Interdisciplinary Sciences: Computational Life Sciences.

Enrichment Disequilibrium: a novel approach for measuring the degree of enrichment after gene enrichment test.

Yongshuai Jiang, Mingming Zhang, Xiaodan Guo, 2012, Biochemical and biophysical research communications.

Genome-wide haplotype association study identifies BLM as a risk gene for prostate cancer in Chinese population

Yongshuai Jiang, Hongchao Lv, Mingming Zhang, 2015, Tumor Biology.

Predict potential drug targets from the ion channel proteins based on SVM.

Peng Sun, Zhenwei Shang, Ruijie Zhang, 2010, Journal of theoretical biology.

Blood Genomics Identifies Three Subtypes of Systemic Lupus Erythematosus: “IFN-High,” “NE-High,” and “Mixed”

Q. Shen, Chao Wang, Xinwei Yan, 2021, Mediators of inflammation.

Identifying Highly Conserved and Highly Differentiated Gene Ontology Categories in Human Populations

Xia Li, Yongshuai Jiang, Xuehong Zhang, 2011, PloS one.

MCPerm: A Monte Carlo Permutation Method for Accurately Correcting the Multiple Testing in a Meta-Analysis of Genetic Association Studies

Yongshuai Jiang, Ruijie Zhang, Hongchao Lv, 2014, PloS one.

Novel strategies to mine alcoholism-related haplotypes and genes by combining existing knowledge framework

Xia Li, Yun Xiao, Binsheng Gong, 2009, Science in China Series C: Life Sciences.

Meta-Analysis of 125 Rheumatoid Arthritis-Related Single Nucleotide Polymorphisms Studied in the Past Two Decades

Yongshuai Jiang, Guoping Tang, Hongchao Lv, 2012, PloS one.

CDRH: Database of Complex Disease-Related Haplotype in Human

Yongshuai Jiang, Xuehong Zhang, P. Sun, 2011 .

A novel stepwise support vector machine (SVM) method based on optimal feature combination for predicting miRNA precursors

Ruijie Zhang, Rongsheng Zhu, Liangde Xu, 2011 .

The expanded human disease network combining protein–protein interaction information

Xia Li, Yongshuai Jiang, Xuehong Zhang, 2011, European Journal of Human Genetics.

Mining disease genes using integrated protein–protein interaction and gene–gene co-regulation information

Maozu Guo, Xiaoyan Liu, P. Xuan, 2015, FEBS open bio.

Genome-wide haplotype association study identifies risk genes for non-small cell lung cancer.

Hongchao Lv, Ruijie Zhang, Chonghui Liu, 2018, Journal of theoretical biology.

Genome-wide haplotype association analysis identifies SERPINB9, SERPINE2, GAK, and HSP90B1 as novel risk genes for oral squamous cell carcinoma

Yongshuai Jiang, Hongchao Lv, Wenhua Lv, 2016, Tumor Biology.

Multifactor Dimensionality Reduction for Detecting Haplotype-Haplotype Interaction

Zhen Wang, Zhiqiang Chen, Chen Huang, 2009, 2009 Sixth International Conference on Fuzzy Systems and Knowledge Discovery.

A Novel Method to Select High-risk Disease-Related Regions after a Genome Wide Haplotype-Based Association Study: An Application to Alcoholism

Zhen Wang, Xia Li, Mingming Zhang, 2009, 2009 Sixth International Conference on Fuzzy Systems and Knowledge Discovery.

A Systematic Method Based on Haplotype Analysis: Application to Risk Alleles and Genes Mining for RA

Zhen Wang, Xia Li, Zhiqiang Chen, 2008, 2008 Fourth International Conference on Natural Computation.

Assessing the patterns of linkage disequilibrium in genic regions of the human genome

Yongshuai Jiang, P. Sun, Guoping Tang, 2011, The FEBS journal.

The molecular subtypes of autoimmune diseases

Ruijie Zhang, Zerun Song, Shuai Li, 2024, Computational and structural biotechnology journal.