Katharina T. Huber

发表

Characterizing Cell-Decomposable Metrics

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2008, Electron. J. Comb..

Rooting for phylogenetic networks pdf

Leo van Iersel, Charles Semple, Mark Jones, 2019, ArXiv.

Antipodal Metrics and Split Systems

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 2002, Eur. J. Comb..

Recognizing Treelike k-Dissimilarities

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2012, J. Classif..

Compatible decompositions and block realizations of finite metrics

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2008, Eur. J. Comb..

Recovering a phylogenetic tree using pairwise closure operations

Charles Semple, Mike A. Steel, Katharina T. Huber, 2005, Appl. Math. Lett..

Counting vertices and cubes in median graphs of circular split systems

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2008, Eur. J. Comb..

Three-Way Symbolic Tree-Maps and Ultrametrics

Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz, 2017, J. Classif..

The relation graph

Katharina T. Huber, Vincent Moulton, V. Moulton, 2002, Discret. Math..

Four Characters Suffice to Convexly Define a Phylogenetic Tree

Mike A. Steel, Katharina T. Huber, Vincent Moulton, 2005, SIAM J. Discret. Math..

Identifying phylogenetic trees

Charles Semple, Katharina T. Huber, Magnus Bordewich, 2005, Discret. Math..

A Practical Algorithm for Reconstructing Level-1 Phylogenetic Networks

Leo van Iersel, Steven Kelk, Katharina T. Huber, 2009, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Evolution through segmental duplications and losses: a Super-Reconciliation approach

Nadia El-Mabrouk, Katharina T. Huber, Manuel Lafond, 2020, Algorithms for Molecular Biology.

Tree Reconstruction from Triplet Cover Distances

Mike A. Steel, Katharina T. Huber, 2014, Electron. J. Comb..

Encoding and Constructing 1-Nested Phylogenetic Networks with Trinets

Katharina T. Huber, Vincent Moulton, 2012, Algorithmica.

Geometric medians in reconciliation spaces of phylogenetic trees

Katharina T. Huber, Vincent Moulton, Marie-France Sagot, 2018, Inf. Process. Lett..

LEV1ATHAN: A level-1 heuristic

Steven Kelk, Katharina T. Huber, Radoslaw Suchecki, 2009 .

Six Points Suffice: How to Check for Metric Consistency

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2001, Eur. J. Comb..

From event-labeled gene trees to species trees

Katharina T. Huber, Vincent Moulton, Peter F. Stadler, 2012, BMC Bioinformatics.

Replacing cliques by stars in quasi-median graphs

Charles Semple, Katharina T. Huber, Vincent Moulton, 2004, Discret. Appl. Math..

From metrics to split systems and back

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2011 .

An Algorithm for Computing Cutpoints in Finite Metric Spaces

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2009, J. Classif..

Phylogenetic networks that are their own fold-ups

Katharina T. Huber, Guillaume E. Scholz, K. Huber, 2018, Adv. Appl. Math..

Quasi-median graphs from sets of partitions

Hans-Jürgen Bandelt, Katharina T. Huber, Vincent Moulton, 2002, Discret. Appl. Math..

Recovering trees from well-separated multi-state characters

Katharina T. Huber, K. Huber, 2004, Discret. Math..

Combinatorial properties of triplet covers for binary trees

Stefan Grünewald, Mike A. Steel, Katharina T. Huber, 2018, Adv. Appl. Math..

Blocks and Cut Vertices of the Buneman Graph

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2011, SIAM J. Discret. Math..

ape 3.0: New tools for distance-based phylogenetics and evolutionary analysis in R

Katharina T. Huber, Emmanuel Paradis, Andrei-Alin Popescu, 2012, Bioinform..

Recovering tree-child networks from shortest inter-taxa distance information pdf

Charles Semple, Katharina T. Huber, Vincent Moulton, 2017, ArXiv.

Characterizing weak compatibility in terms of weighted quartets

Charles Semple, Stefan Grünewald, Katharina T. Huber, 2009, Adv. Appl. Math..

19th International Workshop on Algorithms in Bioinformatics, WABI 2019, September 8-10, 2019, Niagara Falls, NY, USA

Katharina T. Huber, Dan Gusfield, Jesper Jansson, 2019, WABI.

Recognizing and realizing cactus metrics pdf

Katharina T. Huber, Yukihiro Murakami, Momoko Hayamizu, 2019, Inf. Process. Lett..

PADRE: a package for analyzing and displaying reticulate evolution

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2009, Bioinform..

On the structure of the tight-span of a totally split-decomposable metric

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2006, Eur. J. Comb..

From metrics to networks: The tight span

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2011 .

Hierarchies from Lowest Stable Ancestors in Nonbinary Phylogenetic Networks

Katharina T. Huber, Vincent Moulton, Taoyang Wu, 2018, J. Classif..

The Complexity of Deriving Multi-Labeled Trees from Bipartitions

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2008, J. Comput. Biol..

Affine Maps That Induce Polyhedral Complex Isomorphisms

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 2000, Discret. Comput. Geom..

‘Lassoing’ a phylogenetic tree I: basic properties, shellings, and covers

Mike A. Steel, Katharina T. Huber, Andreas W. M. Dress, 2012, Journal of mathematical biology.

A matroid associated with a phylogenetic tree

Mike A. Steel, Katharina T. Huber, Andreas W. M. Dress, 2014, Discret. Math. Theor. Comput. Sci..

Some new perspectives regarding sparse continuous models for discrete data structures

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 1999, Electron. Notes Discret. Math..

Basic Phylogenetic Combinatorics: Bibliography

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2011 .

Worst-case optimal approximation algorithms for maximizing triplet consistency within phylogenetic networks

Steven Kelk, Jaroslaw Byrka, Pawel Gawrychowski, 2007, J. Discrete Algorithms.

Quarnet Inference Rules for Level-1 Networks

Charles Semple, Katharina T. Huber, Vincent Moulton, 2017, Bulletin of mathematical biology.

Block realizations of finite metrics and the tight-span construction I: The embedding theorem

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2008, Appl. Math. Lett..

Characterizing block graphs in terms of their vertex-induced partitions

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2014, Australas. J Comb..

Consistency of Topological Moves Based on the Balanced Minimum Evolution Principle of Phylogenetic Inference

Olivier Gascuel, Katharina T. Huber, Vincent Moulton, 2009, IEEE/ACM Transactions on Computational Biology & Bioinformatics.

The complexity of comparing multiply-labelled trees by extending phylogenetic-tree metrics pdf

Nadia El-Mabrouk, Katharina T. Huber, Vincent Moulton, 2018, Theor. Comput. Sci..

A GRASP-based approach for the Pure Parsimony Haplotype Inference problem

Katharina T. Huber, Pierre Chardaire, Radoslaw Suchecki, 2010, 2010 2nd Computer Science and Electronic Engineering Conference (CEEC).

Tree-Based Unrooted Phylogenetic Networks

Andrew Francis, Katharina T. Huber, Vincent Moulton, 2018, Bulletin of mathematical biology.

Reconstructing Phylogenetic Level-1 Networks from Nondense Binet and Trinet Sets

Leo van Iersel, Katharina T. Huber, Vincent Moulton, 2014, Algorithmica.

Imputing Supertrees and Supernetworks from Quartets

Katharina T. Huber, Vincent Moulton, Barbara Holland, 2006, WABI.

Basic Phylogenetic Combinatorics

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2011 .

Representing Partitions on Trees

Charles Semple, Katharina T. Huber, Vincent Moulton, 2014, SIAM J. Discret. Math..

From split systems to networks

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2011 .

Phylogenetic networks

Katharina T. Huber, Vincent Moulton, 2007, Mathematics of Evolution and Phylogeny.

The polytopal structure of the tight-span of a totally split-decomposable metric

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2018, Discret. Math..

The Tight Span of an Antipodal Metric Space: Part II—Geometrical Properties

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2004, Discret. Comput. Geom..

Connectivity calculus

Katharina T. Huber, Andreas W. M. Dress, Vincent Moulton, 2003, Appl. Math. Lett..

Delta additive and Delta ultra-additive maps, Gromov's trees, and the Farris transform

Barbara R. Holland, Katharina T. Huber, Jacobus H. Koolen, 2005, Discret. Appl. Math..

An Algorithm for Computing Virtual Cut Points in Finite Metric Spaces

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2007, COCOA.

Reconstructing the History of Syntenies Through Super-Reconciliation

Nadia El-Mabrouk, Katharina T. Huber, Vincent Moulton, 2018, RECOMB-CG.

PSIKO2: a fast and versatile tool to infer population stratification on various levels in GWAS

Katharina T. Huber, Andrei-Alin Popescu, K. Huber, 2015, Bioinform..

Beyond Representing Orthology Relations by Trees

Katharina T. Huber, G. E. Scholz, 2016, Algorithmica.

Computing a Consensus of Multilabeled Trees

Sabine Storandt, Katharina T. Huber, Vincent Moulton, 2012, ALENEX.

A graph-theoretical invariant of topological spaces

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2009, Appl. Math. Lett..

Metrics on Multilabeled Trees: Interrelationships and Diameter Bounds

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2011, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

The tight span of an antipodal metric space - Part I: : Combinatorial properties

Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, 2005, Discret. Math..

Weakly displaying trees in temporal tree-child network pdf

Simone Linz, Katharina T. Huber, Vincent Moulton, 2020, ArXiv.

Diversities and the Generalized Circumradius

Paul F. Tupper, Katharina T. Huber, Vincent Moulton, 2021, 2110.13383.

Optimal realizations and the block decomposition of a finite metric space

Katharina T. Huber, Vincent Moulton, Andreas Spillner, 2021, Discrete Applied Mathematics.

Phylogenetic Networks, A Way to Cope with Complex Evolutionary Processes

Katharina T. Huber, 2021, CIAC.

Level-2 networks from shortest and longest distances

Leo van Iersel, Katharina T. Huber, Vincent Moulton, 2021, Discret. Appl. Math..

Encoding and ordering X-cactuses

Katharina T. Huber, Vincent Moulton, Taoyang Wu, 2021, Adv. Appl. Math..

Imputing supertrees and supernetworks from quartets.

Barbara R. Holland, Katharina T. Huber, Vincent Moulton, 2007 .

The Phylogenetic Handbook: Split networks. A tool for exploring complex evolutionary relationships in molecular data

Katharina T. Huber, Vincent Moulton, V. Moulton, 2009 .

How Much Information is Needed to Infer Reticulate Evolutionary Histories?

Katharina T. Huber, Vincent Moulton, Taoyang Wu, 2014, Systematic biology.

Reconstructing fully-resolved trees from triplet cover distances

Katharina T. Huber, Mike Steel, M. Steel, 2014 .

A Novel Insight into the Perfect Phylogeny Problem

Katharina T. Huber, K. Huber, S. Grünewald, 2006 .

Folding and unfolding phylogenetic trees and networks

Katharina T. Huber, Vincent Moulton, Mike Steel, 2015, Journal of Mathematical Biology.

Identifying and defining trees

Katharina T. Huber, K. Huber, S Gruenewald, 2012 .

An explicit computation of the injective hull of certain finite metric spaces in terms of their associated Buneman complex

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 2002 .

Some Uses of the Farris Transform in Mathematics and Phylogenetics—A Review

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 2007 .

Hereditarily Optimal Realizations of Consistent Metrics

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 2006 .

Orthology relations, symbolic ultrametrics, and cographs

Katharina T. Huber, Vincent Moulton, Peter F. Stadler, 2013, Journal of mathematical biology.

A comparison between two distinct continuous models in projective cluster theory: The median and the tight-span construction

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 1998 .

Totally Split-Decomposable Metrics of Combinatorial Dimension Two

Katharina T. Huber, Andreas W. M. Dress, A. Dress, 2001 .

Recovering normal networks from shortest inter-taxa distance information

Charles Semple, Katharina T. Huber, Vincent Moulton, 2018, Journal of Mathematical Biology.

A Novel and Fast Approach for Population Structure Inference Using Kernel-PCA and Optimization

Katharina T. Huber, Martin Trick, Andrei-Alin Popescu, 2014, Genetics.

Metric spaces in pure and applied mathematics

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 2001 .

On the number of vertices and edges of the Buneman graph

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 1997 .

Hereditarily Optimal Realizations: Why are they Relevant in Phylogenetic Analysis, and how does one Compute them

Katharina T. Huber, Vincent Moulton, Andreas W. M. Dress, 2001 .