Joe Shuga

发表

Massively parallel digital transcriptional profiling of single cells

Grace X. Y. Zheng, Nolan G. Ericson, T. Mikkelsen, 2016, Nature Communications.

Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex

Alex A. Pollen, W. J. Kent, J. Shuga, 2017, Science.

Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex

Alex A. Pollen, Robert C. Jones, A. May, 2014, Nature Biotechnology.

Analysis of individual cells identifies cell‐to‐cell variability following induction of cellular senescence

J. Shuga, S. Melov, R. Lebofsky, 2017, Aging cell.

Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing

Hugo Y. K. Lam, Winnie S. Liang, Daoud M. Meerzaman, 2021, Nature Biotechnology.

Molecular Identity of Human Outer Radial Glia during Cortical Development

Alex A. Pollen, J. Shuga, A. Kriegstein, 2015, Cell.

Single cell RNA Seq reveals dynamic paracrine control of cellular variation

Rona S. Gertner, N. Friedman, R. Raychowdhury, 2014, Nature.

Environmental and Molecular Mutagenesis 51:851^870 (2010) Review Article Selected Technologies for Measuring Acquired Genetic Damage in Humans

J. Shuga, R. Mathies, P. Hainaut, 2022 .

Establishing Cerebral Organoids as Models of Human-Specific Brain Evolution

Ian T. Fiddes, Zev N. Kronenberg, Madeline G. Andrews, 2018, Cell.

Integrated Molecular Analysis Indicates Undetectable Change in DNA Damage in Mice after Continuous Irradiation at ~ 400-fold Natural Background Radiation

J. Shuga, L. Samson, B. Engelward, 2012, Environmental health perspectives.

Single-cell multiplex gene detection and sequencing with microfluidically generated agarose emulsions.

J. Shuga, R. Mathies, D. Fletcher, 2011, Angewandte Chemie.

In vitro erythropoiesis from bone marrow-derived progenitors provides a physiological assay for toxic and mutagenic compounds

H. Lodish, J. Shuga, L. Samson, 2007, Proceedings of the National Academy of Sciences.

Modulation of Ras signaling alters the toxicity of hydroquinone, a benzene metabolite and component of cigarette smoke

J. Shuga, C. Vulpe, Luoping Zhang, 2014, BMC Cancer.

Joint single cell DNA-Seq and RNA-Seq of gastric cancer reveals subclonal signatures of genomic instability and gene expression

Noemi Andor, Hanlee P. Ji, Rajiv Bharadwaj, 2018, bioRxiv.

Assessment of genetic damage in healthy and diseased tissue.

J. Shuga, P. Hainaut, Martyn T. Smith, 2011, IARC scientific publications.

Single molecule quantitation and sequencing of rare translocations using microfluidic nested digital PCR

N. Rothman, R. Vermeulen, J. Shuga, 2013, Nucleic Acids Research.

High-performance single cell genetic analysis using microfluidic emulsion generator arrays.

Richard Novak, Richard A Mathies, J. Shuga, 2010, Analytical chemistry.

Utilizing functional genomics in yeast to discover novel biomarkers of benzene toxicity in humans

J. Shuga, C. Vulpe, Luoping Zhang, 2009 .

MICRODROPLET EMULSION GENERATOR ARRAYS FOR HIGH- THROUGHPUT SINGLE CELL GENETIC VARIATION ANALYSIS

R. Mathies, D. Fletcher, Luoping Zhang, 2010 .

Fluidic Logic Used in a Systems Approach to Enable Integrated Single-Cell Functional Analysis

Kyle W. Hukari, K. Livak, Xiaohui Wang, 2016, Front. Bioeng. Biotechnol..

Bone marrow genotoxicity of 2,5‐dimethylfuran, a green biofuel candidate

J. Shuga, C. Vulpe, Luoping Zhang, 2012, Environmental and Molecular Mutagenesis.

Modulation of Ras signaling alters the toxicity of hydroquinone, a benzene metabolite and component of cigarette smoke

J. Shuga, C. Vulpe, Luoping Zhang, 2014, BMC Cancer.

The Space Omics and Medical Atlas (SOMA) and international astronaut biobank

Francine E. Garrett-Bakelman, Caleb M. Schmidt, San-Huei Lai Polo, 2024, Nature.