Bishwajit Kundu

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Most Variable Genes and Transcription Factors in Acute Lymphoblastic Leukemia Patients

A. Tomar, B. Kundu, R. Agarwal, 2019, Interdisciplinary Sciences: Computational Life Sciences.

In-silico design of an immunoinformatics based multi-epitope vaccine against Leishmania donovani

B. Kundu, M. Ghosh, Shubham Vashishtha, 2022, BMC Bioinformatics.

In-silico design of an immunoinformatics based multi-epitope vaccine against Leishmania donovani

M. Ghosh, Shubham Vashishtha, Subhadip Saha, 2022, BMC Bioinformatics.

J. Gomes, Parul Gupta, P. Vivekanandan, 2020, bioRxiv.

Deoxyelephantopin-a novel PPARγ agonist regresses pressure overload-induced cardiac fibrosis via IL-6/STAT-3 pathway in crosstalk with PKCδ.

A. Bandyopadhyay, S. Sarkar, Anirban Banik, 2023, European journal of pharmacology.

Antimicrobial‐resistant Neisseria gonorrhoeae can be targeted using inhibitors against evolutionary conservedl‐asparaginase

Jasdeep Singh, B. Kundu, Shubham Vashishtha, 2022, Journal of cellular biochemistry.

Dioscorea bulbifera L. (Dioscoreaceae): A review of its ethnobotany, pharmacology and conservation needs

D. Pandey, Vijay Kumar, B. Kundu, 2020 .

Penetratin inhibits α-synuclein fibrillation and improves locomotor functions in mice model of Parkinson’s disease

A. Gautam, D. Otzen, G. Raghava, 2022, bioRxiv.

Manipulation of unfolding-induced protein aggregation by peptides selected for aggregate-binding ability through phage display library screening.

A. Shukla, P. Guptasarma, B. Kundu, 2002, Biochemical and biophysical research communications.

Curcumin binds to the pre-fibrillar aggregates of Cu/Zn superoxide dismutase (SOD1) and alters its amyloidogenic pathway resulting in reduced cytotoxicity.

S. Deep, M. A. I. Khan, Ankit Srivastava, 2015, Biochimica et biophysica acta.

Antifungal activities of selected essential oils against Fusarium oxysporum f. sp. lycopersici 1322, with emphasis on Syzygium aromaticum essential oil.

Satyawati Sharma, Abhishek Sharma, Ankit Srivastava, 2017, Journal of bioscience and bioengineering.

Use of a hydrophobic dye to indirectly probe the structural organization and conformational plasticity of molecules in amorphous aggregates of carbonic anhydrase.

P. Guptasarma, B. Kundu, Bishwajit Kundu, 2002, Biochemical and biophysical research communications.

Interplay between CedA, rpoB and double stranded DNA: A step towards understanding CedA mediated cell division in E. coli.

A. Tomar, Pankaj Sharma, B. Kundu, 2018, International journal of biological macromolecules.

Formation of amyloid fibrils by bovine carbonic anhydrase.

S. Bansal, B. Kundu, Anshul Rana, 2008, Biochimica et biophysica acta.

Polyphenols in combination with β-cyclodextrin can inhibit and disaggregate α-synuclein amyloids under cell mimicking conditions: A promising therapeutic alternative.

S. Gautam, Jasdeep Singh, P. Chowdhury, 2017, Biochimica et biophysica acta. Proteins and proteomics.

Energetics of Spike Protein Opening of SARS-CoV-1 and SARS-CoV-2 and Its Variants of Concern: Implications in Host Receptor Scanning and Transmission.

U. Dobrindt, Jasdeep Singh, N. Z. Ehtesham, 2022, Biochemistry.

The Gelsolin Pathogenic D187N Mutant Exhibits Altered Conformational Stability and Forms Amyloidogenic Oligomers.

Ashish, P. Arya, Jasdeep Singh, 2018, Biochemistry.

Distinct functional properties of secretory l-asparaginase Rv1538c involved in phagosomal survival of Mycobacterium tuberculosis.

B. Kundu, A. K. Patel, Arti Kataria, 2021, Biochimie.

L-Asparaginase of Leishmania donovani: Metabolic target and its role in Amphotericin B resistance

Ashish, M. Khan, Jasdeep Singh, 2017, International journal for parasitology. Drugs and drug resistance.

Structural stability and functional analysis of L-asparaginase from Pyrococcus furiosus

P. Mishra, S. Bansal, B. Kundu, 2010, Biochemistry (Moscow).

Heat induces end to end repetitive association in P. furiosusl-asparaginase which enables its thermophilic property

Ashish, Maulik D. Badmalia, S. Nath, 2020, Scientific Reports.

Protein engineering: Methods and applications

S. Bansal, B. Kundu, Bishwajit Kundu, 2022, Advances in Protein Molecular and Structural Biology Methods.

Hyperthermophilic l-asparaginase bypasses monomeric intermediates during folding to retain cooperativity and avoid amyloid assembly.

B. Kundu, D. Garg, Bishwajit Kundu, 2017, Archives of biochemistry and biophysics.

Production and Profitability Study of White Jute Seed at Farmer’s Level in Different Areas of Bangladesh

Md. Babul Hossain, N. Uddin, M. R. Karim, 2021, Haya: The Saudi Journal of Life Sciences.

Stable self-assembled nanostructured hen egg white lysozyme exhibits strong anti-proliferative activity against breast cancer cells.

S. Paul, S. Mahanta, T. Chaudhuri, 2015, Colloids and surfaces. B, Biointerfaces.

Emerging typology and framing of climate-resilient agriculture in South Asia

Shilpi Kundu, B. Kundu, Rajesh Kumar, 2021 .

Modulation of prion polymerization and toxicity by rationally designed peptidomimetics.

Sakshi Gupta, Sarika Gupta, V. Haridas, 2017, The Biochemical journal.

Exploring the aggregation-prone regions from structural domains of human TDP-43.

Vijay Kumar, A. Tomar, A. Lynn, 2019, Biochimica et biophysica acta. Proteins and proteomics.

Specific Keratinase Derived Designer Peptides Potently Inhibit A β Aggregation Resulting in Reduced Neuronal Toxicity and Apoptosis.

A. Grover, Ankit Srivastava, B. Kundu, 2019, The Biochemical journal.

Endoplasmic Reticulum Stress Induces Myostatin High Molecular Weight Aggregates and Impairs Mature Myostatin Secretion

I. Vorberg, J. Reimann, Philip Denner, 2018, Molecular Neurobiology.

Hydrophobic dye inhibits aggregation of molten carbonic anhydrase during thermal unfolding and refolding

P. Guptasarma, B. Kundu, Bishwajit Kundu, 1999, Proteins.

Thermodynamic stabilization of the folded domain of prion protein inhibits prion infection in vivo.

J. L. Mills, W. Surewicz, W. Swietnicki, 2013, Cell reports.

Arjunolic acid, a peroxisome proliferator-activated receptor α agonist, regresses cardiac fibrosis by inhibiting non-canonical TGF-β signaling

S. Sengupta, Jasdeep Singh, S. Sarkar, 2017, Journal of Biological Chemistry.

Clues for divergent, polymorphic amyloidogenesis through dissection of amyloid forming steps of bovine carbonic anhydrase and its critical amyloid forming stretch.

D. Garg, Bishwajit Kundu, 2016, Biochimica et biophysica acta.

Polyphenols in combination with β-cyclodextrin can inhibit and disaggregate α-synuclein amyloids under cell mimicking conditions: A promising therapeutic alternative.

Jasdeep Singh, P. Chowdhury, Pankaj Sharma, 2017, Biochimica et biophysica acta. Proteins and proteomics.

Curcumin binds to the pre-fibrillar aggregates of Cu/Zn superoxide dismutase (SOD1) and alters its amyloidogenic pathway resulting in reduced cytotoxicity.

S. Deep, M. A. I. Khan, Ankit Srivastava, 2015, Biochimica et biophysica acta.

DNA intercalators as amyloid assembly modulators: mechanistic insights

Pankaj Sharma, Jasdeep Singh, Ankit Srivastava, 2017 .

Selective interception of gelsolin amyloidogenic stretch results in conformationally distinct aggregates with reduced toxicity.

P. Arya, S. Vasaikar, P. Mishra, 2014, ACS chemical neuroscience.

Formation of amyloid fibrils by bovine carbonic anhydrase.

S. Bansal, Anshul Rana, Teemish Praveen Gupta, 2008, Biochimica et biophysica acta.

Predicting alternate structure attainment and amyloidogenesis: a nonlinear signal analysis approach.

Deepak Dugar, A. Grover, B. Kundu, 2005, Biochemical and biophysical research communications.

L-Asparaginase as a new molecular target against leishmaniasis: insights into the mechanism of action and structure-based inhibitor design.

Ankit Srivastava, K. Sinha, Bishwajit Kundu, 2015, Molecular Biosystems.

Nucleation-dependent conformational conversion of the Y145Stop variant of human prion protein: Structural clues for prion propagation

E. M. Jones, W. Surewicz, B. Kundu, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Amyloid fibrillation of the glaucoma associated myocilin protein is inhibited by epicatechin gallate (ECG)

A. Grover, A. Kumari, B. Kundu, 2022, RSC advances.

Prion protein transcription is auto-regulated through dynamic interactions with G-quadruplex motifs in its own promoter.

M. A. Khan, P. Kumari, P. Vivekanandan, 2020, Biochimica et biophysica acta. Gene regulatory mechanisms.

Evolutionarily conserved heat shock protein, HtpX, as an adjunct target against antibiotic‐resistant Neisseria gonorrhoeae

Jasdeep Singh, Shubham Vashishtha, S. Thakur, 2023, Journal of cellular biochemistry.

Identification and validation of l‐asparaginase as a potential metabolic target against Mycobacterium tuberculosis

Jasdeep Singh, B. Kundu, Arti Kataria, 2018, Journal of cellular biochemistry.

Hyperthermophilic asparaginase mutants with enhanced substrate affinity and antineoplastic activity: structural insights on their mechanism of action

A. Verma, G. Mukherjee, P. Mishra, 2012, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

Mutation landscape of SARS-CoV-2 reveals five mutually exclusive clusters of leading and trailing single nucleotide substitutions

S. Dhamija, J. Gomes, Parul Gupta, 2020, bioRxiv.

Application of a protein domain as chaperone for enhancing biological activity and stability of other proteins.

R. Bansal, Jasdeep Singh, B. Kundu, 2020, Journal of biotechnology.

N‐terminal domain of Pyrococcus furiosus l‐asparaginase functions as a non‐specific, stable, molecular chaperone

A. Thakur, B. Kundu, R. Mishra, 2013, The FEBS journal.

The excised heat-shock domain of alphaB crystallin is a folded, proteolytically susceptible trimer with significant surface hydrophobicity and a tendency to self-aggregate upon heating.

Rachna Chaba, A. Shukla, P. Guptasarma, 2004, Protein expression and purification.

Hybrid mesoporous silica-based nanocarriers for responsive drug release in cancerous cell line

Smrutirekha Mishra, L. Nebhani, B. Kundu, 2020, Applied Nanoscience.

Interplay between DtxR and nitric oxide reductase activities: a functional genomics approach indicating involvement of homologous protein domains in bacterial pathogenesis

J. K. Deb, Shwetank Gupta, S. Bansal, 2007, International journal of experimental pathology.

Heterologous expression of an engineered protein domain acts as chaperone and enhances thermotolerance of Escherichia coli.

B. Kundu, Akanksha Saini, D. Garg, 2018, International journal of biological macromolecules.

Peptide scanning-based identification of regions of gamma-II crystallin involved in thermal aggregation: evidence of the involvement of structurally analogous, helix-containing loops from the two double Greek key domains of the molecule.

A. Shukla, P. Guptasarma, B. Kundu, 2003, Archives of biochemistry and biophysics.

Most Variable Genes and Transcription Factors in Acute Lymphoblastic Leukemia Patients

A. Tomar, R. Agarwal, Bishwajit Kundu, 2019, Interdisciplinary Sciences: Computational Life Sciences.

Prion metal interaction: is prion pathogenesis a cause or a consequence of metal imbalance?

S. Bansal, Anshul Rana, D. Gnaneswari, 2009, Chemico-biological interactions.

Biophysical insight into the heparin‐peptide interaction and its modulation by a small molecule

N. Tiwari, Ankit Srivastava, M. Munde, 2018, Journal of Molecular Recognition.

Silibinin: an inhibitor for a high-expressed BCL-2A1/BFL1 protein, linked with poor prognosis in breast cancer.

I. Singh, Pooja Mittal, Bishwajit Kundu, 2023, Journal of biomolecular structure & dynamics.

Phosphorylation-mediated regulation of the Bacillus anthracis phosphoglycerate mutase by the Ser/Thr protein kinase PrkC.

Ashutosh Kumar Singh, Daniel J. Blankenberg, D. Blankenberg, 2023, Biochemical and biophysical research communications.

J. Gomes, Parul Gupta, P. Vivekanandan, 2020, bioRxiv.

Identification and validation of L‐asparaginase as a potential metabolic target againstMycobacterium tuberculosis

B. Kundu, Bishwajit Kundu, 2018 .

Modulation of proteinase K-resistant prion protein in cells and infectious brain homogenate by redox iron: implications for prion replication and disease pathogenesis.

M. Mohan, S. Basu, Neena Singh, 2007, Molecular biology of the cell.