Pajau Vangay

发表

US Immigration Westernizes the Human Gut Microbiome

Benjamin M Hillmann, Robin R. Shields-Cutler, Gabriel A. Al-Ghalith, 2018, Cell.

The National Microbiome Data Collaborative: enabling microbiome science

Yaxing Wei, Lee Ann McCue, Ranjeet Devarakonda, 2020, Nature Reviews Microbiology.

Stable Engraftment of Bifidobacterium longum AH1206 in the Human Gut Depends on Individualized Features of the Resident Microbiome.

Benjamin M Hillmann, I. Martínez, J. Walter, 2016, Cell host & microbe.

Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies

Dan Knights, John Garbe, Ryan Hunter, 2016, Nature Biotechnology.

Food microbe tracker: a web-based tool for storage and comparison of food-associated microbes.

M. Wiedmann, Qi Sun, P. Vangay, 2013, Journal of food protection.

Associations Between Nutrition, Gut Microbiome, and Health in A Novel Nonhuman Primate Model

Gabriel A. Al-Ghalith, D. Knights, M. Murtaugh, 2017, bioRxiv.

Substituting whole grains for refined grains in a 6-wk randomized trial has a modest effect on gut microbiota and immune and inflammatory markers of healthy adults.

H. Rasmussen, D. Knights, B. Goldin, 2017, The American journal of clinical nutrition.

Antibiotics, pediatric dysbiosis, and disease.

J. Gerber, D. Knights, Tonya L. Ward, 2015, Cell host & microbe.

Complex host genetics influence the microbiome in inflammatory bowel disease

Dan Knights, Hailiang Huang, Jenny Sauk, 2014, Genome Medicine.

Captivity humanizes the primate microbiome

Dan Knights, Kenneth E. Glander, Dominic A. Travis, 2016, Proceedings of the National Academy of Sciences.

Chemotherapy‐driven dysbiosis in the intestinal microbiome

Gabriel A. Al-Ghalith, S. Massart, S. Massart, 2015, Alimentary pharmacology & therapeutics.

Microbiome Learning Repo (ML Repo): A public repository of microbiome regression and classification tasks

Dan Knights, Pajau Vangay, Benjamin M Hillmann, 2019, GigaScience.

Fecal concentrations of bacterially derived vitamin K forms are associated with gut microbiota composition but not plasma or fecal cytokine concentrations in healthy adults.

Xueyan Fu, S. Booth, H. Rasmussen, 2017, The American journal of clinical nutrition.

Multi-omics analysis of inflammatory bowel disease.

Christopher E. McKinlay, D. Knights, P. Vangay, 2014, Immunology letters.

Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in mice

Dan Knights, Martin J Blaser, Alexander Alekseyenko, 2016, Nature Microbiology.

Daily Sampling Reveals Personalized Diet-Microbiome Associations in Humans.

Benjamin M Hillmann, Robin R. Shields-Cutler, Gabriel A. Al-Ghalith, 2019, Cell host & microbe.

Participatory Microbiome Research With Hmong and Karen Communities: Lessons Learned

D. Knights, P. Vangay, K. Culhane-Pera, 2021, Journal of Participatory Research Methods.

Cell Host & Microbe Perspective Antibiotics , Pediatric Dysbiosis , and Disease

J. Gerber, D. Knights, Tonya L. Ward, 2015 .

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative’s Workshop and Follow-On Activities

Luke R. Thompson, William D. Duncan, Stanton L. Martin, 2021, mSystems.

University of Groningen Complex host genetics influence the microbiome in inflammatory bowel disease

Gabriel A. Al-Ghalith, M. Daly, C. Huttenhower, 2017 .

Substituting whole grains for refined grains in a 6-wk randomized trial favorably affects energy-balance metrics in healthy men and postmenopausal women.

H. Rasmussen, D. Knights, B. Goldin, 2017, The American journal of clinical nutrition.

Introduction to Metadata and Ontologies: Everything You Always Wanted to Know About Metadata and Ontologies (But Were Afraid to Ask)

Luke R. Thompson, R. Timme, E. Wood-Charlson, 2020 .

Wild primate microbiomes prevent weight gain in germ-free mice

Robin R. Shields-Cutler, Gabriel A. Al-Ghalith, D. Knights, 2020, Animal microbiome.

Refinement of the Listeria monocytogenes σB regulon through quantitative proteomic analysis.

M. Wiedmann, R. Orsi, K. Boor, 2013, Microbiology.

Antibiotics, pediatric dysbiosis, and disease.

J. Gerber, D. Knights, Tonya L. Ward, 2015, Cell host & microbe.

Associations Between Nutrition, Gut Microbiome, and Health in A Novel Nonhuman Primate Model

Gabriel A. Al-Ghalith, D. Knights, M. Murtaugh, 2017, Scientific Reports.

Substituting whole grains for refined grains in a 6-wk randomized trial has a modest effect on gut microbiota and immune and inflammatory markers of healthy adults.

H. Rasmussen, D. Knights, B. Goldin, 2017, The American journal of clinical nutrition.

Classification of Listeria monocytogenes Persistence in Retail Delicatessen Environments Using Expert Elicitation and Machine Learning

P Vangay, J Steingrimsson, M Wiedmann, 2014, Risk analysis : an official publication of the Society for Risk Analysis.

Food Safety And Data-Driven Science: Developments Using Machine Learning And Databases

Pajau Vangay, P. Vangay, Pajau Vangay, 2014 .

Multi-omics analysis of inflammatory bowel disease.

D. Knights, Hu Huang, Christopher E McKinlay, 2014, Immunology letters.