Sascha Bulik

发表

Modeling the MHC class I pathway by combining predictions of proteasomal cleavage,TAP transport and MHC class I binding

P. Kloetzel, H. Rammensee, Bjoern Peters, 2005, Cellular and Molecular Life Sciences CMLS.

Identifying MHC Class I Epitopes by Predicting the TAP Transport Efficiency of Epitope Precursors

Bjoern Peters, S. Bulik, R. Tampé, 2003, The Journal of Immunology.

Enzymatic features of the glucose metabolism in tumor cells

S. Bulik, H. Holzhütter, M. König, 2011, The FEBS journal.

Epitope Precursors Predicting the TAP Transport Efficiency of Identifying MHC Class I Epitopes by Endert and

Bjoern Peters, S. Bulik, R. Tampé, 2003 .

Kinetic hybrid models composed of mechanistic and simplified enzymatic rate laws – a promising method for speeding up the kinetic modelling of complex metabolic networks

J. Selbig, S. Bulik, H. Holzhütter, 2009, The FEBS journal.

The relative importance of kinetic mechanisms and variable enzyme abundances for the regulation of hepatic glucose metabolism – insights from mathematical modeling

S. Bulik, H. Holzhütter, Nikolaus Berndt, 2016, BMC Biology.

Characterizing the N-Terminal Processing Motif of MHC Class I Ligands1

H. Rammensee, Bjoern Peters, S. Bulik, 2008, The Journal of Immunology.

Quantifying the Contribution of the Liver to Glucose Homeostasis: A Detailed Kinetic Model of Human Hepatic Glucose Metabolism

S. Bulik, H. Holzhütter, M. König, 2012, PLoS Comput. Biol..

Kinetic modelling of quantitative proteome data predicts metabolic reprogramming of liver cancer

S. Bulik, H. Holzhütter, J. Sáez-Rodríguez, 2018, bioRxiv.

Implications of enzyme deficiencies on mitochondrial energy metabolism and reactive oxygen species formation of neurons involved in rotenone‐induced Parkinson's disease: a model‐based analysis

S. Bulik, Nikolaus Berndt, H. Holzhütter, 2013, The FEBS journal.

HepatoNet1: a comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology

C. Gille, S. Bulik, M. König, 2010, Molecular systems biology.

Corrigendum to “Kinetic Modeling of the Mitochondrial Energy Metabolism of Neuronal Cells: The Impact of Reduced α-Ketoglutarate Dehydrogenase Activities on ATP Production and Generation of Reactive Oxygen Species”

S. Bulik, H. Holzhütter, Nikolaus Berndt, 2012, International journal of cell biology.

Kinetic Modeling of the Mitochondrial Energy Metabolism of Neuronal Cells: The Impact of Reduced α-Ketoglutarate Dehydrogenase Activities on ATP Production and Generation of Reactive Oxygen Species

S. Bulik, H. Holzhütter, Nikolaus Berndt, 2012, International journal of cell biology.

HEPATOKIN1 is a biochemistry-based model of liver metabolism for applications in medicine and pharmacology

S. Bulik, H. Holzhütter, M. König, 2018, Nature Communications.

Renal oncocytoma characterized by the defective complex I of the respiratory chain boosts the synthesis of the ROS scavenger glutathione

M. Attimonelli, M. Babu, S. Bulik, 2017, Oncotarget.

Local oxygen homeostasis during various neuronal network activity states in the mouse hippocampus

A. Draguhn, S. Bulik, H. Holzhütter, 2017, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

Quantifying the Contribution of Defective Ribosomal Products to Antigen Production: A Model-Based Computational Analysis

Bjoern Peters, S. Bulik, H. Holzhütter, 2005, Journal of Immunology.

A Model-Based Computational Analysis Ribosomal Products to Antigen Production: Quantifying the Contribution of Defective

Bjoern Peters, S. Bulik, H. Holzhütter, 2005 .

A multiscale modelling approach to assess the impact of metabolic zonation and microperfusion on the hepatic carbohydrate metabolism

Hermann-Georg Holzhütter, Marius Stefan Horger, Nikolaus Berndt, 2018, PLoS Comput. Biol..

Regulation of liver metabolism by the endosomal GTPase Rab5.

M. Mann, A. Shevchenko, H. Holzhütter, 2015, Cell reports.

Cytosolic processing of proteasomal cleavage products can enhance the presentation efficiency of MHC-1 epitopes.

S. Bulik, C. Ebeling, Björn Peters, 2004, Genome informatics. International Conference on Genome Informatics.

Antimalarial drug targets in Plasmodium falciparum predicted by stage-specific metabolic network analysis

Andreas Hoppe, Hermann-Georg Holzhütter, Carola Huthmacher, 2010, BMC Systems Biology.

IGERS: inferring Gibbs energy changes of biochemical reactions from reaction similarities.

J. Gasteiger, S. Bulik, A. Hoppe, 2010, Biophysical journal.

Kinetic Modeling of theMitochondrial EnergyMetabolism of Neuronal Cells : The Impact of Reduced α-Ketoglutarate Dehydrogenase Activities on ATP Production and Generation of Reactive Oxygen Species

S. Bulik, H. Holzhütter, Nikolaus Berndt, 2014 .

A novel variant of the 13C-methacetin liver function breath test that eliminates the confounding effect of individual differences in systemic CO2 kinetics

S. Bulik, H. Holzhütter, D. Meierhofer, 2020, Archives of Toxicology.

The stability and robustness of metabolic states: identifying stabilizing sites in metabolic networks

R. Steuer, J. Selbig, S. Bulik, 2007, Molecular systems biology.

A Graph-Based Framework for Multiscale Modeling of Physiological Transport

D. Pal, S. Raha, D. Meierhofer, 2021, bioRxiv.

Physiologically based toxicokinetic models and in silico predicted partition coefficients to estimate tetrachlorodibenzo-p-dioxin transfer from feed into growing pigs

S. Bulik, R. Pieper, H. Schafft, 2019, Archives of Toxicology.