Nikhat Zafar

发表

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome".

Jaideep P. Sundaram, Christopher R. Hauser, Samuel V. Angiuoli, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Large-Scale Transcriptional Response to Hypoxia in Aspergillus fumigatus Observed Using RNAseq Identifies a Novel Hypoxia Regulated ncRNA

W. Nierman, S. Pakala, B. Barker, 2014, Mycopathologia.

CoreGenes: A computational tool for identifying and cataloging "core" genes in a set of small genomes

Raja Mazumder, Donald Seto, Nikhat Zafar, 2002, BMC Bioinformatics.

Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome

Vivek Krishnakumar, Michalis Hadjithomas, Cédric Feschotte, 2016, eLife.

Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling

Klaus O. Kopec, P. Hegemann, A. Bateman, 2013, Genome Biology.

Genome Properties: a system for the investigation of prokaryotic genetic content for microbiology, genome annotation and comparative genomics

Owen White, Daniel H. Haft, Lauren M. Brinkac, 2005, Bioinform..

Sequencing of mitochondrial genomes of nine Aspergillus and Penicillium species identifies mobile introns and accessory genes as main sources of genome size variability

W. Nierman, G. Payne, S. Pakala, 2012, BMC Genomics.

Transposition Pathovars in Genes Involved in Virulence 1448 A Reveals Divergence among pv . phaseolicola Pseudomonas syringae Whole-Genome Sequence Analysis of

O. White, T. Creasy, C. Fraser, 2005 .

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000

Jia Liu, Alan Collmer, C Robin Buell, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Comparative Genomics of Emerging Human Ehrlichiosis Agents

Jonathan Crabtree, Jaideep P. Sundaram, Rekha Seshadri, 2006, PLoS genetics.

Genome of Geobacter sulfurreducens: Metal Reduction in Subsurface Environments

J A Eisen, O. White, C. Fraser, 2003, Science.

Structural flexibility in the Burkholderia mallei genome.

O. White, D. Radune, C. Fraser, 2004, Proceedings of the National Academy of Sciences of the United States of America.

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv . tomato DC 3000

Ian T. Paulsen, C. Robin Buell, Alan Collmer, 2003 .

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

Bernard Henrissat, Thomas S. Brettin, Daniel H. Haft, 2009, Applied and Environmental Microbiology.

The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough

Rekha Seshadri, Kevin Tran, Gerrit Voordouw, 2004, Nature Biotechnology.

The JCVI standard operating procedure for annotating prokaryotic metagenomic shotgun sequencing data

S. Kravitz, S. Yooseph, Johannes Goll, 2010, Standards in genomic sciences.

Hidden genomic evolution in a morphospecies—The landscape of rapidly evolving genes in Tetrahymena

Shelby L. Bidwell, Jie Xiong, Wentao Yang, 2019, PLoS biology.

The comprehensive microbial resource

Erin Beck, Qi Yang, Owen White, 2000, Nucleic Acids Res..

Comparative Genomic Evidence for a Close Relationship between the Dimorphic Prosthecate Bacteria Hyphomonas neptunium and Caulobacter crescentus

D. Radune, J. Mrázek, M. Laub, 2006, Journal of bacteriology.

Application of global computational tools GeneOrder and CoreGenes to the comparative analyses of chordopoxvirus genomes

Raja Mazumder, Donald Seto, Nikhat Zafar, 2002, Inf. Sci..

Comparisons of gene colinearity in genomes using GeneOrder2.0.

R Mazumder, R. Mazumder, D. Seto, 2001, Trends in biochemical sciences.