M. Ginkel

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

Hugh D. Spence, Autumn A. Cuellar, A. Cornish-Bowden, 2003, Bioinform..

Visual setup of logical models of signaling and regulatory networks with ProMoT

Steffen Klamt, Julio Saez-Rodriguez, Ernst Dieter Gilles, 2006, BMC Bioinformatics.

ProMoT: modular modeling for systems biology

Ernst Dieter Gilles, Martin Ginkel, Sebastian Mirschel, 2009, Bioinform..

Mathematical Modeling of Signaling Cascades: Principles and Future Prospects

E. Gilles, B. Schoeberl, G. Müller, 2004 .

Automatic decomposition of kinetic models of signaling networks minimizing the retroactivity among modules

Julio Saez-Rodriguez, Ernst Dieter Gilles, Martin Ginkel, 2008, ECCB.

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

Hiroaki Kitano, Masaru Tomita, Peter J. Hunter, 2003, Bioinform..

Dynamics of the direct methanol fuel cell (DMFC): experiments and model-based analysis

Kai Sundmacher, Ernst Dieter Gilles, Martin Ginkel, 2001 .

FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps

Steffen Klamt, Jörg Stelling, Ernst Dieter Gilles, 2003, Bioinform..