Shang-Qian Xie

Fast and accurate assembly of Nanopore reads via progressive error correction and adaptive read selection

Ying Chen, Feng Luo, Chuan-Le Xiao, 2020, bioRxiv.

MECAT: fast mapping, error correction, and de novo assembly for single-molecule sequencing reads

Feng Luo, Zhi Xie, Ying Chen, 2017, Nature Methods.

RPFdb: a database for genome wide information of translated mRNA generated from ribosome profiling

Yan Wang, Zhi Xie, Hongyu Li, 2015, Nucleic Acids Res..

ISOdb: A Comprehensive Database of Full-Length Isoforms Generated by Iso-Seq

Peng Ling, Jie Zhu, Shang-Qian Xie, 2018, International journal of genomics.

MECAT: an ultra-fast mapping, error correction and de novo assembly tool for single-molecule sequencing reads

Ying Chen, Yan Wang, Chuan-Le Xiao, 2016, bioRxiv.

Evaluating Structural Variation Detection Tools for Long-Read Sequencing Datasets in Saccharomyces cerevisiae

Shang-Qian Xie, Shang-Qian Xie, Ying Chen, 2020, Frontiers in Genetics.

N6-Methyladenine DNA Modification in Human Genome

Guang-Rong Yan, Chuan-Le Xiao, Minghui He, 2017, bioRxiv.

MDR: an integrative DNA N6-methyladenine and N4-methylcytosine modification database for Rosaceae

Chuan-Le Xiao, Shang-Qian Xie, Jing Huang, 2019, Horticulture Research.