Viviane Praz

发表

Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis.

M. J. van de Vijver, J. Bergh, S. Fox, 2006, Journal of the National Cancer Institute.

Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization

Gergana Bounova, Mauro Delorenzi, Winship Herr, 2014 .

Philipp Bucher, Thomas Junier, Rouaïda Cavin Périer, 2000, Nucleic Acids Res..

HCFC1 is a common component of active human CpG-island promoters and coincides with ZNF143, THAP11, YY1, and GABP transcription factor occupancy

Frédéric Schütz, Winship Herr, Joëlle Michaud, 2013, Genome research.

THAP11F80L cobalamin disorder-associated mutation reveals normal and pathogenic THAP11 functions in gene expression and cell proliferation

W. Herr, V. Praz, Maykel Lopes, 2019, bioRxiv.

Gene Expression Pro fi ling in Breast Cancer : Understanding the Molecular Basis of Histologic Grade To Improve Prognosis

C. Sotiriou, S. Loi, B. Haibe-Kains, 2006 .

Can Survival Prediction Be Improved By Merging Gene Expression Data Sets?

P. Bucher, V. Praz, P. Sperisen, 2009, PloS one.

EWSR1-ATF1 dependent 3D connectivity regulates oncogenic and differentiation programs in Clear Cell Sarcoma

Martin J. Aryee, M. Rivera, Nicolò Riggi, 2022, Nature Communications.

Mechanism of selective recruitment of RNA polymerases II and III to snRNA gene promoters

V. Praz, A. Vannini, N. Hernandez, 2018, Genes & development.

Gene duplication and neofunctionalization: POLR3G and POLR3GL

Michael P Washburn, Viviane Praz, Nouria Hernandez, 2014, Genome research.

Defining the RNA polymerase III transcriptome: Genome-wide localization of the RNA polymerase III transcription machinery in human cells.

V. Praz, N. Hernandez, Donatella Canella, 2010, Genome research.

Diurnal regulation of RNA polymerase III transcription is under the control of both the feeding-fasting response and the circadian clock.

V. Praz, F. Schütz, N. Hernandez, 2017, Genome research.

Widespread occurrence of non-canonical transcription termination by human RNA polymerase III

V. Praz, M. Teichmann, D. Romascano, 2011, Nucleic acids research.

Human MAF1 targets and represses active RNA polymerase III genes by preventing recruitment rather than inducing long-term transcriptional arrest

V. Praz, A. Orioli, N. Hernandez, 2016, Genome research.

Differential regulation of RNA polymerase III genes during liver regeneration

N. Guex, M. Delorenzi, S. Raghav, 2018, Nucleic acids research.

Cycles of gene expression and genome response during mammalian tissue regeneration

N. Guex, W. Herr, V. Praz, 2018, Epigenetics & Chromatin.

Genome-Wide Analysis of SREBP1 Activity around the Clock Reveals Its Combined Dependency on Nutrient and Circadian Signals

N. Guex, M. Delorenzi, S. Raghav, 2014, PLoS genetics.

A multiplicity of factors contributes to selective RNA polymerase III occupancy of a subset of RNA polymerase III genes in mouse liver.

M. Delorenzi, V. Praz, N. Hernandez, 2012, Genome research.

HCF-2 inhibits cell proliferation and activates differentiation-gene expression programs

W. Herr, V. Praz, Oleksandr Dergai, 2019, bioRxiv.

Loss of the RNA polymerase III repressor MAF1 confers obesity resistance

J. Auwerx, V. Praz, S. Chua, 2015, Genes & development.

TWIST1 expression is associated with high-risk neuroblastoma and promotes primary and metastatic tumor growth

Nicolò Riggi, V. Praz, J. Scoazec, 2021, Communications Biology.

The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases

Oliver Horlacher, Damian Szklarczyk, Christian von Mering, 2015, Nucleic Acids Res..

Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis.

M. J. van de Vijver, C. Sotiriou, S. Loi, 2006, Journal of the National Cancer Institute.

Rapid Recapitulation of Nonalcoholic Steatohepatitis upon Loss of Host Cell Factor 1 Function in Mouse Hepatocytes

N. Guex, W. Herr, V. Praz, 2018, Molecular and Cellular Biology.

Metastatic Tumor Growth

V. Praz, H. Sartelet, J. Joseph, 2021 .

The Eukaryotic Promoter Database, EPD: new entry types and links to gene expression data

Philipp Bucher, Rouaïda Périer, Viviane Praz, 2002, Nucleic Acids Res..

MAF1 is a chronic repressor of RNA polymerase III transcription in the mouse

V. Praz, N. Hernandez, I. Willis, 2019, Scientific Reports.

Chronic repression by MAF1 supports futile RNA cycling as a mechanism for obesity resistance

V. Praz, N. Hernandez, I. Willis, 2019, bioRxiv.

Changes in the transcriptional profile of transporters in the intestine along the anterior-posterior and crypt-villus axes

M. Delorenzi, V. Praz, M. Roberts, 2005, BMC Genomics.

EPD in its twentieth year: towards complete promoter coverage of selected model organisms

Philipp Bucher, Christoph D. Schmid, Rouaïda Périer, 2005, Nucleic Acids Res..

The Eukaryotic Promoter Database EPD: the impact of in silico primer extension

Philipp Bucher, Mauro Delorenzi, Christoph D. Schmid, 2004, Nucleic Acids Res..

The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases

Joshua L. Payne, Christian J. A. Sigrist, Brian J. Stevenson, 2015, Nucleic Acids Res..

The Eukaryotic Promoter Database (EPD)

P. Bucher, C. Bonnard, R. Périer, 2000, Nucleic Acids Res..

Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization

N. Guex, J. Rougemont, U. Schibler, 2014, Genome research.

Edinburgh Explorer Quantifying ChIP-seq data

G. Bounova, M. Leleu, Y. Jarosz, 2017 .

Development of a novel aging clock based on chromatin accessibility

Ferdinand von Meyenn, V. Praz, Cheyenne Rechsteiner, 2022, bioRxiv.

CIC-DUX4 Chromatin Profiling Reveals New Epigenetic Dependencies and Actionable Therapeutic Targets in CIC-Rearranged Sarcomas

C. Antonescu, Nicolò Riggi, L. Cironi, 2024, Cancers.

Genomic Study of RNA Polymerase II and III SNAPc-Bound Promoters Reveals a Gene Transcribed by Both Enzymes and a Broad Use of Common Activators

V. Praz, D. Romascano, N. Hernandez, 2012, PLoS genetics.

Signal search analysis server

Giovanna Ambrosini, Philipp Bucher, Viviane Praz, 2003, Nucleic Acids Res..