Ming Zhan

发表

Functional Significance for a Heterogenous Ribonucleoprotein A18 Signature RNA Motif in the 3′-Untranslated Region of Ataxia Telangiectasia Mutated and Rad3-related (ATR) Transcript*

M. Zhan, N. Nalabothula, Qingyuan Yang, 2010, The Journal of Biological Chemistry.

Inferring regulatory networks.

J. Xuan, Yue Wang, Huaizhou Li, 2008, Frontiers in bioscience : a journal and virtual library.

Systematic intervention of transcription for identifying network response to disease and cellular phenotypes

Huai Li, Ming Zhan, Huai Li, 2006, Bioinform..

En masse nascent transcription analysis to elucidate regulatory transcription factors

Ming Zhan, Myriam Gorospe, Tomoko Kawai, 2006, Nucleic acids research.

Breast Cancer Stem Cells Transition between Epithelial and Mesenchymal States Reflective of their Normal Counterparts

Dong Wang, Stephen T. C. Wong, Li Shang, 2013, Stem cell reports.

Targeting RPL39 and MLF2 reduces tumor initiation and metastasis in breast cancer by inhibiting nitric oxide synthase signaling

Stephen T. C. Wong, Mauro Ferrari, Stephen T C Wong, 2014, Proceedings of the National Academy of Sciences.

Differential dependency network analysis to identify condition-specific topological changes in biological networks

Robert Clarke, Huai Li, Zhen Zhang, 2009, Bioinform..

Analysis of Gene Coexpression by B-Spline Based CoD Estimation

Huai Li, Yu Sun, Ming Zhan, 2007, EURASIP J. Bioinform. Syst. Biol..

The discovery of transcriptional modules by a two-stage matrix decomposition approach

Huai Li, Yu Sun, Ming Zhan, 2007, Bioinform..

The Human Glucocorticoid Receptor as an RNA-Binding Protein: Global Analysis of Glucocorticoid Receptor-Associated Transcripts and Identification of a Target RNA Motif

M. Gorospe, M. Zhan, K. Pearce, 2011, The Journal of Immunology.

Elucidation of a C-Rich Signature Motif in Target mRNAs of RNA-Binding Protein TIAR

M. Gorospe, K. Mazan-Mamczarz, P. Anderson, 2007, Molecular and Cellular Biology.

Identification and Functional Outcome of mRNAs Associated with RNA-Binding Protein TIA-1

Geppino Falco, Ming Zhan, Myriam Gorospe, 2005, Molecular and Cellular Biology.

NF90 selectively represses the translation of target mRNAs bearing an AU-rich signature motif

M. Gorospe, Xiaoling Yang, M. Zhan, 2009, Nucleic acids research.

Identification of a signature motif in target mRNAs of RNA-binding protein AUF1

M. Gorospe, K. Mazan-Mamczarz, M. Zhan, 2008, Nucleic acids research.

Identification of a target RNA motif for RNA-binding protein HuR.

M. Gorospe, Xiaoling Yang, I. López de Silanes, 2004, Proceedings of the National Academy of Sciences of the United States of America.

NF 90 selectively represses the translation of target mRNAs bearing an AUrich signature motif

M. Gorospe, Xiaoling Yang, M. Zhan, 2009 .

Protein TIA-1 mRNAs Associated with RNA-Binding Identification and Functional Outcome of

M. Gorospe, G. Falco, Xiaoling Yang, 2005 .

Genome wide profiling of human embryonic stem cells (hESCs), their derivatives and embryonal carcinoma cells to develop base profiles of U.S. Federal government approved hESC lines

Ying Liu, Ming Zhan, Huai Li, 2006, BMC Developmental Biology.

Comparison of the Gene Expression Profiles of Human Fetal Cortical Astrocytes with Pluripotent Stem Cell Derived Neural Stem Cells Identifies Human Astrocyte Markers and Signaling Pathways and Transcription Factors Active in Human Astrocytes

Anastasia G. Efthymiou, Nasir Malik, M. Rao, 2014, PloS one.

Whole Genome Analysis of Human Neural Stem Cells Derived from Embryonic Stem Cells and Stem and Progenitor Cells Isolated from Fetal Tissue

M. Zhan, M. Rao, S. Stice, 2007, Stem cells.

Exploring pathways from gene co-expression to network dynamics.

M. Zhan, Huai Li, Yu Sun, 2009, Methods in molecular biology.

INFERRING BIOLOGICAL NETWORKS

Y. Wang, J. Xuan, M. Zhan, 2006 .

Conservation and variation of gene regulation in embryonic stem cells assessed by comparative genomics

Ming Zhan, Takumi Miura, Xiangru Xu, 2005, Cell Biochemistry and Biophysics.

LincRNA-p21 suppresses target mRNA translation.

Kotb Abdelmohsen, S. Srikantan, M. Gorospe, 2012, Molecular cell.

Identification of Prognosis-Relevant Subgroups in Patients with Chemoresistant Triple-Negative Breast Cancer

Stephen T. C. Wong, W. Symmans, Jenny C. Chang, 2013, Clinical Cancer Research.

Efficient and Rapid Derivation of Primitive Neural Stem Cells and Generation of Brain Subtype Neurons From Human Pluripotent Stem Cells

J. Sheng, Fuhai Li, M. Zhan, 2013, Stem cells translational medicine.

Enhanced translation by Nucleolin via G-rich elements in coding and non-coding regions of target mRNAs

Mihee M. Kim, S. Srikantan, M. Gorospe, 2011, Nucleic acids research.

Identifying a Kinase Network Regulating FGF14:Nav1.6 Complex Assembly Using Split-Luciferase Complementation

M. Zhan, A. Shavkunov, F. Laezza, 2015, PloS one.

Klotho, stem cells, and aging

Javier A. Neyra, J. Neyra, M. Zhan, 2015, Clinical interventions in aging.

Expression profiling of human glial precursors

M. Zhan, M. Rao, J. Chesnut, 2008, BMC Developmental Biology.

Characterization of Progenitor-Cell-Specific Genes Identified by Subtractive Suppression Hybridization

M. Zhan, M. Rao, Jingli Cai, 2004, Developmental Neuroscience.

Evolutionarily Conserved Transcriptional Co-Expression Guiding Embryonic Stem Cell Differentiation

Ying Liu, Ming Zhan, Huai Li, 2008, PloS one.

Knowledge-guided gene ranking by coordinative component analysis

Robert Clarke, Huai Li, Eric P. Hoffman, 2010, BMC Bioinformatics.

Mitochondrial UCP4 mediates an adaptive shift in energy metabolism and increases the resistance of neurons to metabolic and oxidative stress

Ming Zhan, Mark P. Mattson, M. Mattson, 2007, NeuroMolecular Medicine.

RNA binding activity of the recessive parkinsonism protein DJ-1 supports involvement in multiple cellular pathways

Ming Zhan, Nancy M Bonini, Myriam Gorospe, 2008, Proceedings of the National Academy of Sciences.

Temporal and spatial transcriptional profiles of aging in Drosophila melanogaster.

M. Zhan, S. Zou, H. Yamaza, 2007, Genome research.

Unraveling Regulatory Programs for NF-kappaB, p53 and MicroRNAs in Head and Neck Squamous Cell Carcinoma

Ming Zhan, Huai Li, Sige Zou, 2013, PloS one.

Gene expression atlas of the mouse central nervous system: impact and interactions of age, energy intake and gender

M. Mattson, A. Zonderman, Suresh Poosala, 2007, Genome Biology.

HuR Uses AUF1 as a Cofactor To Promote p16INK4 mRNA Decay

M. Gorospe, Wengong Wang, Q. Cui, 2010, Molecular and Cellular Biology.

Cross-species transcriptional profiles establish a functional portrait of embryonic stem cells.

Ying Liu, Ming Zhan, Huai Li, 2007, Genomics.

Ribosomal protein mRNAs are primary targets of regulation in RNase-L-induced senescence

M. Gorospe, K. Mazan-Mamczarz, M. Zhan, 2009, RNA biology.

Three-dimensional vasculature reconstruction of tumour microenvironment via local clustering and classification

Stephen T. C. Wong, Tegy J. Vadakkan, M. Dickinson, 2013, Interface Focus.

Integrative modeling of transcriptional regulatory networks in head and neck cancer

Zhong Chen, B. Yan, Huai Li, 2012 .

DrugComboRanker: drug combination discovery based on target network analysis

Lei Huang, Stephen T. C. Wong, Jinwen Ma, 2014, Bioinform..

The B-MYB Transcriptional Network Guides Cell Cycle Progression and Fate Decisions to Sustain Self-Renewal and the Identity of Pluripotent Stem Cells

Ronald A. Li, Ming Zhan, Kenneth R. Boheler, 2012, PloS one.

Copper homeostasis gene discovery in Drosophila melanogaster

P. Batterham, M. Zhan, S. Zou, 2007, BioMetals.

RNA Motif Transcripts and Identification of a Target Glucocorticoid Receptor-Associated RNA-Binding Protein : Global Analysis of The Human Glucocorticoid Receptor as an and Cristiana

M. Gorospe, M. Zhan, K. Pearce, 2010 .

Estrogen hormone is an essential sex factor inhibiting inflammation and immune response in COVID-19

Philip R. O. Payne, Fuhai Li, P. Payne, 2022, Scientific Reports.

Stage-specific role for shh in dopaminergic differentiation of human embryonic stem cells induced by stromal cells.

M. Zhan, M. Rao, Xianmin Zeng, 2010, Stem cells and development.

Activation of the ATM-Snail pathway promotes breast cancer metastasis.

Stephen T. C. Wong, B. Zhou, Bo Xu, 2012, Journal of molecular cell biology.

Identification by Automated Screening of a Small Molecule that Selectively Eliminates Neural Stem Cells Derived from hESCs but Not Dopamine Neurons

M. Zhan, M. Rao, Xianmin Zeng, 2009, PloS one.

Genomic studies to explore self-renewal and differentiation properties of embryonic stem cells.

M. Zhan, Ming Zhan, 2008, Frontiers in bioscience : a journal and virtual library.

The discovery of transcriptional modules by a two-stage matrix decomposition approach

Yu Sun, Huai Li, Ming Zhan, 2007, Bioinform..

Title The B-MYB transcriptional network guides cell cycle progression and fate decisions to sustain self-renewal and the identity of pluripotent stem cells

Ronald A. Li, K. Boheler, M. Zhan, 2012 .

Unraveling transcriptional regulatory programs by integrative analysis of microarray and transcription factor binding data

Huai Li, Ming Zhan, M. Zhan, 2008, Bioinform..

Aging studies in Drosophila melanogaster.

M. Zhan, Yaning Sun, S. Zou, 2013, Methods in molecular biology.